CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80153	Canola	cytosol	96.55	98.82
CDX80155	Canola	cytosol	96.55	98.82
CDY66093	Canola	cytosol	94.83	97.06
CDY27457	Canola	cytosol	78.16	95.77
AT2G48150.1	Thale cress	cytosol	90.23	92.35
CDY15038	Canola	cytosol	91.38	85.03
CDX67915	Canola	cytosol	81.61	80.68
CDX79424	Canola	cytosol	81.03	80.11
CDX89171	Canola	cytosol	80.46	78.65
CDX93937	Canola	cytosol	81.03	77.47
Zm00001d047448_P002	Maize	extracellular, mitochondrion, plasma membrane	74.14	75.88
Os03t0358100-01	Rice	plasma membrane	71.26	73.37
Solyc09g064850.2.1	Tomato	nucleus	70.69	72.35
KRH67169	Soybean	cytosol	70.69	72.35
VIT_07s0104g00320.t01	Wine grape	cytosol	70.11	71.76
GSMUA_Achr5P07930_001	Banana	cytosol	70.11	71.76
KRG95489	Soybean	cytosol	70.11	70.52
TraesCS4B01G152800.1	Wheat	cytosol	74.14	68.98
TraesCS4D01G162000.1	Wheat	plastid	74.14	68.98
TraesCS4A01G142000.1	Wheat	cytosol	67.82	68.6
KRH71458	Soybean	endoplasmic reticulum	64.94	66.47
KRH31991	Soybean	cytosol	64.37	65.88
CDX86767	Canola	cytosol	64.37	65.5
CDY70265	Canola	cytosol	63.79	64.91
HORVU4Hr1G035380.1	Barley	cytosol	74.71	64.04
KXG39330	Sorghum	cytosol	69.54	61.11
CDY54730	Canola	cytosol	57.47	59.17
CDY23931	Canola	cytosol	57.47	59.17
CDX84772	Canola	cytosol	57.47	59.17
CDY10812	Canola	cytosol	57.47	59.17
CDY60808	Canola	cytosol	45.4	56.43
CDY25499	Canola	cytosol	51.72	54.22
CDY34354	Canola	cytosol	51.15	53.29
CDY44221	Canola	endoplasmic reticulum	54.02	47.72
CDX83486	Canola	endoplasmic reticulum	54.02	47.72
CDY37628	Canola	mitochondrion, plastid	61.49	46.72
CDY25288	Canola	mitochondrion, plastid	61.49	46.72
CDX72332	Canola	plastid	56.9	42.67
CDY01168	Canola	plastid	56.9	42.67
CDY13458	Canola	plastid	56.9	42.67
CDY69660	Canola	plastid	55.75	41.63
CDX76773	Canola	plastid	52.87	38.17
CDY07183	Canola	plastid	21.26	29.6

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	GO:A0A078JZD9	UniProt:A0A078JZD9	EnsemblPlants:CDY72064	ProteinID:CDY72064
ProteinID:CDY72064.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0004602	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114
GO:GO:0098869	InterPro:GPX_AS	InterPro:GPX_CS	EnsemblPlantsGene:GSBRNA2T00023417001	InterPro:Glutathione_peroxidase	InterPro:IPR000889
PFAM:PF00255	PIRSF:PIRSF000303	PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355
PANTHER:PTHR11592	PANTHER:PTHR11592:SF17	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0004EF4591	:

Description

BnaC04g51730DGlutathione peroxidase (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JZD9]

Coordinates

chrLK048767:-:1045..2318

Molecular Weight (calculated)

19796.7 Da

IEP (calculated)

9.052

GRAVY (calculated)

-0.334

Length

174 amino acids

Sequence
(BLAST)

001: REREMGASVS VPERSVHQFT VKDSSGKDVN LSIYQGKVLL LVNVASKCGF TESNYTQLTE LYRKYKDQGF EILAFPCNQF LYQEPGTSQE AHEFACTRFQ
101: AEYPVFQKVR VNGQNAAPLY KFLKASKPTF LGSRIKWNFT KFLVSKDGIV IDRYGTMVTP LSIEKDIIKA LEEA

Best Arabidopsis Sequence Match ( AT2G48150.1 )
(BLAST)

001: MGASASVPER SVHQFTVKDS SGKDLNMSIY QGKVLLIVNV ASKCGFTETN YTQLTELYRK YKDQDFEILA FPCNQFLYQE PGTSQEAHEF ACERFKAEYP
101: VFQKVRVNGQ NAAPIYKFLK ASKPTFLGSR IKWNFTKFLV GKDGLVIDRY GTMVTPLSIE KDIKKALEDA

Arabidopsis Description

GPX4Probable glutathione peroxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L910]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.