Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035211.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY70265 | Canola | cytosol | 98.83 | 98.83 |
| EES11249 | Sorghum | cytosol | 85.96 | 87.5 |
| Zm00001d002704_P001 | Maize | cytosol | 85.96 | 87.5 |
| TraesCS6D01G228800.1 | Wheat | cytosol | 84.8 | 85.8 |
| TraesCS2D01G407700.1 | Wheat | cytosol | 83.04 | 84.52 |
| TraesCS2B01G429100.1 | Wheat | golgi, plastid | 83.04 | 84.52 |
| Os04t0556300-01 | Rice | plastid | 82.46 | 83.93 |
| TraesCS6B01G278100.1 | Wheat | cytosol | 80.7 | 81.66 |
| Zm00001d026154_P002 | Maize | cytosol | 81.87 | 79.55 |
| Zm00001d029089_P001 | Maize | cytosol | 73.1 | 75.3 |
| KXG31059 | Sorghum | cytosol | 59.65 | 75.0 |
| CDY60808 | Canola | cytosol | 60.23 | 73.57 |
| CDY25288 | Canola | mitochondrion, plastid | 93.57 | 69.87 |
| CDY37628 | Canola | mitochondrion, plastid | 93.57 | 69.87 |
| Zm00001d029085_P001 | Maize | plastid | 49.71 | 69.67 |
| CDX80153 | Canola | cytosol | 66.08 | 66.47 |
| CDX80155 | Canola | cytosol | 66.08 | 66.47 |
| CDY66093 | Canola | cytosol | 65.5 | 65.88 |
| CDY10812 | Canola | cytosol | 64.91 | 65.68 |
| CDY54730 | Canola | cytosol | 64.91 | 65.68 |
| CDY27457 | Canola | cytosol | 54.39 | 65.49 |
| CDX84772 | Canola | cytosol | 64.33 | 65.09 |
| CDY23931 | Canola | cytosol | 64.33 | 65.09 |
| CDX67915 | Canola | cytosol | 66.67 | 64.77 |
| CDX79424 | Canola | cytosol | 66.67 | 64.77 |
| CDY72064 | Canola | cytosol | 65.5 | 64.37 |
| KXG39415 | Sorghum | plastid | 74.85 | 64.32 |
| CDY25499 | Canola | cytosol | 61.99 | 63.86 |
| CDX89171 | Canola | cytosol | 65.5 | 62.92 |
| CDY34354 | Canola | cytosol | 61.4 | 62.87 |
| HORVU6Hr1G063830.2 | Barley | plastid | 85.96 | 62.03 |
| CDX93937 | Canola | cytosol | 65.5 | 61.54 |
| TraesCS6A01G246400.1 | Wheat | mitochondrion, plastid | 84.21 | 60.76 |
| Os02t0664000-01 | Rice | extracellular | 83.63 | 60.08 |
| CDY15038 | Canola | cytosol | 64.91 | 59.36 |
| Zm00001d051392_P001 | Maize | mitochondrion | 84.21 | 58.54 |
| CDY44221 | Canola | endoplasmic reticulum | 66.08 | 57.36 |
| CDX83486 | Canola | endoplasmic reticulum | 66.08 | 57.36 |
| CDY69660 | Canola | plastid | 69.01 | 50.64 |
| CDY13458 | Canola | plastid | 67.25 | 49.57 |
| CDY01168 | Canola | plastid | 67.25 | 49.57 |
| CDX72332 | Canola | plastid | 66.67 | 49.14 |
| CDX76773 | Canola | plastid | 67.25 | 47.72 |
| CDY07183 | Canola | plastid | 23.39 | 32.0 |
Protein Annotations
| MapMan:10.4.2 | Gene3D:3.40.30.10 | GO:A0A078DCI1 | EnsemblPlants:CDX86767 | ProteinID:CDX86767 | ProteinID:CDX86767.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004602 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0055114 | InterPro:GPX_AS | InterPro:GPX_CS | EnsemblPlantsGene:GSBRNA2T00145490001 | InterPro:Glutathione_peroxidase |
| InterPro:IPR000889 | PFAM:PF00255 | PIRSF:PIRSF000303 | PRINTS:PR01011 | ScanProsite:PS00460 | ScanProsite:PS00763 |
| PFscan:PS51355 | PANTHER:PTHR11592 | PANTHER:PTHR11592:SF42 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI0002546934 |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g21570D
Coordinates
chrLK031847:-:538165..539713
Molecular Weight (calculated)
18789.3 Da
IEP (calculated)
8.435
GRAVY (calculated)
-0.280
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAATSSSPK SVHDFTVKDA KGNEVDLSIY KGKVLLIVNV ASQCGLTNSN YTELAQLYQK YKDHGFEILA FPCNQFGNQE PGSNEEIVQF ACTRFKAEYP
101: IFDKVDVNGD KAAPIYKFLK SSKGGLFGSG IKWNFSKFLV DKDGNVVDRY APTTSPLSIE KDLKKLLGVT A
101: IFDKVDVNGD KAAPIYKFLK SSKGGLFGSG IKWNFSKFLV DKDGNVVDRY APTTSPLSIE KDLKKLLGVT A
001: MLRSSIRLLY IRRTSPLLRS LSSSSSSSSS KRFDSAKPLF NSHRIISLPI STTGAKLSRS EHSMAASSEP KSLYDFTVKD AKGNDVDLSI YKGKVLLIVN
101: VASQCGLTNS NYTELAQLYE KYKGHGFEIL AFPCNQFGNQ EPGTNEEIVQ FACTRFKAEY PIFDKVDVNG DKAAPVYKFL KSSKGGLFGD GIKWNFAKFL
201: VDKDGNVVDR FAPTTSPLSI EKDVKKLLGV TA
101: VASQCGLTNS NYTELAQLYE KYKGHGFEIL AFPCNQFGNQ EPGTNEEIVQ FACTRFKAEY PIFDKVDVNG DKAAPVYKFL KSSKGGLFGD GIKWNFAKFL
201: VDKDGNVVDR FAPTTSPLSI EKDVKKLLGV TA
Arabidopsis Description
GPX6Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O48646]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.