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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:mitochondrion, plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
plastid: 27992503
extracellular: 28232208
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os02t0708400-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G11600.1 Os02t0708400-01 AT3G27960.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES11249 Sorghum cytosol 95.24 95.24
TraesCS2D01G407700.1 Wheat cytosol 93.45 93.45
Zm00001d002704_P001 Maize cytosol 92.86 92.86
TraesCS2B01G429100.1 Wheat golgi, plastid 92.26 92.26
Zm00001d026154_P002 Maize cytosol 91.07 86.93
Bra035211.1-P Field mustard cytosol 83.93 82.46
CDX86767 Canola cytosol 83.93 82.46
CDY70265 Canola cytosol 83.33 81.87
Os11t0284900-01 Rice cytosol 59.52 69.44
Os02t0664000-01 Rice extracellular 91.67 64.71
Os03t0358100-01 Rice plasma membrane 62.5 62.13
CDY37628 Canola mitochondrion, plastid 83.33 61.14
CDY25288 Canola mitochondrion, plastid 83.33 61.14
Bra033140.1-P Field mustard mitochondrion, plastid 83.33 61.14
AT4G11600.1 Thale cress mitochondrion 82.14 59.48
Os04t0683850-00 Rice cytosol 38.1 57.66
Os06t0185900-01 Rice plastid 73.21 52.56
Protein Annotations
MapMan:10.4.2Gene3D:3.40.30.10EntrezGene:4336627EMBL:AK062772ProteinID:BAF15438.1ProteinID:BAS90432.1
ProteinID:BAS90433.1ProteinID:EEE61470.1GO:GO:0003674GO:GO:0003824GO:GO:0004601GO:GO:0004602
GO:GO:0005575GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0055114GO:GO:0098869InterPro:GPX_AS
InterPro:GPX_CSInterPro:Glutathione_peroxidaseInterPro:IPR000889EnsemblPlantsGene:Os04g0556300EnsemblPlants:Os04t0556300-01PFAM:PF00255
PIRSF:PIRSF000303PRINTS:PR01011ScanProsite:PS00460ScanProsite:PS00763PFscan:PS51355PANTHER:PTHR11592
PANTHER:PTHR11592:SF42UniProt:Q0JB49SUPFAM:SSF52833InterPro:Thioredoxin-like_sfUniParc:UPI00000A9CB8RefSeq:XP_015635940.1
Description
GLUTATHIONE PEROXIDASE 1Glutathione peroxidase. (Os04t0556300-01);Similar to Glutathione peroxidase. (Os04t0556300-02)
Coordinates
chr4:+:27838701..27840702
Molecular Weight (calculated)
18483.9 Da
IEP (calculated)
8.426
GRAVY (calculated)
-0.312
Length
168 amino acids
Sequence
(BLAST)
001: MAAAPSATSV HDFTVKDASG KDVNLSTYKG KVLLIVNVAS QCGLTNSNYT ELSQLYEKYK VQGFEILAFP CNQFGGQEPG SNEEIVQFAC TRFKAEYPIF
101: DKVDVNGNNA APLYKYLKSN KGGLFGDSIK WNFSKFLVDK EGRVVDRYAP TTSPLSIEKD IKKLLGSS
Best Arabidopsis Sequence Match ( AT4G11600.1 )
(BLAST)
001: MLRSSIRLLY IRRTSPLLRS LSSSSSSSSS KRFDSAKPLF NSHRIISLPI STTGAKLSRS EHSMAASSEP KSLYDFTVKD AKGNDVDLSI YKGKVLLIVN
101: VASQCGLTNS NYTELAQLYE KYKGHGFEIL AFPCNQFGNQ EPGTNEEIVQ FACTRFKAEY PIFDKVDVNG DKAAPVYKFL KSSKGGLFGD GIKWNFAKFL
201: VDKDGNVVDR FAPTTSPLSI EKDVKKLLGV TA
Arabidopsis Description
GPX6Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O48646]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.