Factsheet for Os02t0664000-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 5
mitochondrion 6

Predictors

GFP

MS/MS

Papers

extracellular: 18372294

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0708400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G11600.1	Os02t0708400-01	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G228800.1	Wheat	cytosol	65.97	92.9
Os04t0556300-01	Rice	plastid	64.71	91.67
TraesCS6B01G278100.1	Wheat	cytosol	63.45	89.35
KXG31059	Sorghum	cytosol	48.74	85.29
Bra035211.1-P	Field mustard	cytosol	60.08	83.63
CDX86767	Canola	cytosol	60.08	83.63
CDY70265	Canola	cytosol	59.66	83.04
HORVU6Hr1G063830.2	Barley	plastid	80.67	81.01
Zm00001d051392_P001	Maize	mitochondrion	83.19	80.49
TraesCS6A01G246400.1	Wheat	mitochondrion, plastid	79.41	79.75
Zm00001d029089_P001	Maize	cytosol	55.46	79.52
Zm00001d029085_P001	Maize	plastid	36.55	71.31
KXG39415	Sorghum	plastid	57.98	69.35
Os11t0284900-01	Rice	cytosol	41.18	68.06
Bra033140.1-P	Field mustard	mitochondrion, plastid	63.87	66.38
CDY37628	Canola	mitochondrion, plastid	63.87	66.38
CDY25288	Canola	mitochondrion, plastid	63.87	66.38
AT4G11600.1	Thale cress	mitochondrion	63.45	65.09
Os03t0358100-01	Rice	plasma membrane	44.12	62.13
Os06t0185900-01	Rice	plastid	55.88	56.84
Os04t0683850-00	Rice	cytosol	26.47	56.76

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	EntrezGene:4330235	EMBL:AK058456	ProteinID:BAD28380.1	ProteinID:BAF09573.1
ProteinID:BAS80164.1	ProteinID:EEE57526.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0004602
GO:GO:0006950	GO:GO:0006979	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0048831	GO:GO:0055114	GO:GO:0098869	GO:GO:2000280	InterPro:GPX_AS
InterPro:GPX_CS	InterPro:Glutathione_peroxidase	InterPro:IPR000889	EnsemblPlantsGene:Os02g0664000	EnsemblPlants:Os02t0664000-01	PFAM:PF00255
PIRSF:PIRSF000303	PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355	PANTHER:PTHR11592
PANTHER:PTHR11592:SF42	UniProt:Q6ESJ0	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00003CE6B8	RefSeq:XP_015622746.1
SEG:seg	:	:	:	:	:

Description

GLUTATHIONE PEROXIDASE 3Similar to Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx). (Os02t0664000-01)

Coordinates

chr2:+:26929770..26932403

Molecular Weight (calculated)

25839.9 Da

IEP (calculated)

9.888

GRAVY (calculated)

-0.144

Length

238 amino acids

Sequence
(BLAST)

001: MPSRTAPFIS RLRLLRTAAA LSPFSSSAPP RHSPRILRAI PVGAPHPPRV SAAVSPLVRP VAAGFALFSM ATAASSAASV HDFTVKDASG KDVDLSTFKG
101: KVLLIVNVAS QCGLTNSNYT ELSQLYEKYK DQGFEILAFP CNQFGGQEPG TNEEIVQFAC TRFKAEYPIF DKVDVNGDNT APIYKFLKSS KGGLFGDNIK
201: WNFSKFLVDK EGRVVERYAP TTSPLSMEKD IKKLLGSS

Best Arabidopsis Sequence Match ( AT4G11600.1 )
(BLAST)

001: MLRSSIRLLY IRRTSPLLRS LSSSSSSSSS KRFDSAKPLF NSHRIISLPI STTGAKLSRS EHSMAASSEP KSLYDFTVKD AKGNDVDLSI YKGKVLLIVN
101: VASQCGLTNS NYTELAQLYE KYKGHGFEIL AFPCNQFGNQ EPGTNEEIVQ FACTRFKAEY PIFDKVDVNG DKAAPVYKFL KSSKGGLFGD GIKWNFAKFL
201: VDKDGNVVDR FAPTTSPLSI EKDVKKLLGV TA

Arabidopsis Description

GPX6Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O48646]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.