Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EES05647 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G11600.1 | EES05647 | AT3G27960.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11249 | Sorghum | cytosol | 80.88 | 65.48 |
| TraesCS6D01G228800.1 | Wheat | cytosol | 79.41 | 63.91 |
| TraesCS6B01G278100.1 | Wheat | cytosol | 74.26 | 59.76 |
| Bra035211.1-P | Field mustard | cytosol | 75.0 | 59.65 |
| CDX86767 | Canola | cytosol | 75.0 | 59.65 |
| CDY70265 | Canola | cytosol | 74.26 | 59.06 |
| KXG39415 | Sorghum | plastid | 74.26 | 50.75 |
| EES11677 | Sorghum | cytosol | 63.24 | 50.29 |
| Os02t0664000-01 | Rice | extracellular | 85.29 | 48.74 |
| TraesCS6A01G246400.1 | Wheat | mitochondrion, plastid | 80.15 | 45.99 |
| Zm00001d051392_P001 | Maize | mitochondrion | 83.09 | 45.94 |
| HORVU6Hr1G063830.2 | Barley | plastid | 78.68 | 45.15 |
| CDY37628 | Canola | mitochondrion, plastid | 75.0 | 44.54 |
| CDY25288 | Canola | mitochondrion, plastid | 75.0 | 44.54 |
| Bra033140.1-P | Field mustard | mitochondrion, plastid | 75.0 | 44.54 |
| AT4G11600.1 | Thale cress | mitochondrion | 75.0 | 43.97 |
| OQU83353 | Sorghum | endoplasmic reticulum | 61.03 | 40.49 |
| KXG39330 | Sorghum | cytosol | 56.62 | 38.89 |
| EER87981 | Sorghum | plastid | 65.44 | 38.36 |
Protein Annotations
| MapMan:10.4.2 | Gene3D:3.40.30.10 | UniProt:A0A194YS45 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 |
| GO:GO:0004602 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016491 | GO:GO:0055114 | GO:GO:0098869 | InterPro:GPX_CS | InterPro:Glutathione_peroxidase | InterPro:IPR000889 |
| EnsemblPlants:KXG31059 | ProteinID:KXG31059 | ProteinID:KXG31059.1 | PFAM:PF00255 | PIRSF:PIRSF000303 | PRINTS:PR01011 |
| ScanProsite:PS00763 | PFscan:PS51355 | PANTHER:PTHR11592 | PANTHER:PTHR11592:SF42 | EnsemblPlantsGene:SORBI_3004G290100 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI0007F2A18D | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:63113069..63114047
Molecular Weight (calculated)
15427.3 Da
IEP (calculated)
7.891
GRAVY (calculated)
-0.395
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTSLLFCCS GLTNSNYTEL SQLYEKYKDQ GFEILAFPCN QFGGQEPGTN EEIVQFACTR FKAEYPIFDK VDVNGDNTAP IYKFLKSSKG SLFGENIKWN
101: FSKFLVDKEG RVVERTNFGK FLQKDIKKLL GSPSTL
101: FSKFLVDKEG RVVERTNFGK FLQKDIKKLL GSPSTL
001: MATKEPESVY ELSIEDAKGN NLALSQYKDK VLLIVNVASK CGMTNSNYTE LNELYNRYKD KGLEILAFPC NQFGDEEPGT NDQITDFVCT RFKSEFPIFN
101: KIEVNGENAS PLYKFLKKGK WGIFGDDIQW NFAKFLVDKN GQAVQRYYPT TSPLTLEHDI KNLLNIS
101: KIEVNGENAS PLYKFLKKGK WGIFGDDIQW NFAKFLVDKN GQAVQRYYPT TSPLTLEHDI KNLLNIS
Arabidopsis Description
GPX8Probable glutathione peroxidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBU2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.