Factsheet for HORVU6Hr1G063830.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G069310.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G11600.1	HORVU6Hr1G069310.1	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G228800.1	Wheat	cytosol	70.04	98.22
TraesCS6B01G278100.1	Wheat	cytosol	67.51	94.67
TraesCS6A01G246400.1	Wheat	mitochondrion, plastid	93.25	93.25
Bra035211.1-P	Field mustard	cytosol	62.03	85.96
CDX86767	Canola	cytosol	62.03	85.96
CDY70265	Canola	cytosol	61.6	85.38
Os02t0664000-01	Rice	extracellular	81.01	80.67
KXG31059	Sorghum	cytosol	45.15	78.68
Zm00001d029089_P001	Maize	cytosol	54.85	78.31
Zm00001d051392_P001	Maize	mitochondrion	80.59	77.64
HORVU2Hr1G123750.1	Barley	cytosol	50.63	70.18
Zm00001d029085_P001	Maize	plastid	35.87	69.67
KXG39415	Sorghum	plastid	57.38	68.34
Bra033140.1-P	Field mustard	mitochondrion, plastid	65.82	68.12
CDY25288	Canola	mitochondrion, plastid	65.82	68.12
AT4G11600.1	Thale cress	mitochondrion	66.67	68.1
CDY37628	Canola	mitochondrion, plastid	65.4	67.69
HORVU4Hr1G035380.1	Barley	cytosol	46.84	54.68
HORVU7Hr1G030810.1	Barley	plastid	51.05	46.01

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	EMBL:AK353680	EMBL:AK355585	UniProt:F2CPX8	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0004602	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005829	GO:GO:0005886	GO:GO:0006950
GO:GO:0006979	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0016020	GO:GO:0016491	GO:GO:0046686
GO:GO:0048046	GO:GO:0048831	GO:GO:0055114	GO:GO:0098869	GO:GO:2000280	InterPro:GPX_AS
InterPro:GPX_CS	InterPro:Glutathione_peroxidase	EnsemblPlantsGene:HORVU6Hr1G063830	EnsemblPlants:HORVU6Hr1G063830.2	InterPro:IPR000889	PFAM:PF00255
PIRSF:PIRSF000303	PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355	PANTHER:PTHR11592
PANTHER:PTHR11592:SF42	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002004486	SEG:seg	:

Description

Glutathione peroxidase [Source:UniProtKB/TrEMBL;Acc:F2CPX8]

Coordinates

chrchr6H:-:432105159..432108006

Molecular Weight (calculated)

25728.7 Da

IEP (calculated)

9.545

GRAVY (calculated)

-0.145

Length

237 amino acids

Sequence
(BLAST)

001: MPSRPAPFIH RLRLLRSAVV SPSSAPLPCS RPRLAVPFSQ PPIRAPAFAA AASPLLRPVG ARFSLSSNMA AAASSASSVH DFTVKDASGK DVDLSTYKGK
101: VLLIVNVASQ CGLTNSNYTE LAQLYEKYKD QGFEILAFPC NQFGGQEPGT NEEIVQFACT RFKAEYPIFD KVDVNGDNVA PVYKFLKSSK GSLFGDNIKW
201: NFSKFLVDKD GNVVDRYAPT TSPLSIEKDI KKLLASS

Best Arabidopsis Sequence Match ( AT4G11600.1 )
(BLAST)

001: MLRSSIRLLY IRRTSPLLRS LSSSSSSSSS KRFDSAKPLF NSHRIISLPI STTGAKLSRS EHSMAASSEP KSLYDFTVKD AKGNDVDLSI YKGKVLLIVN
101: VASQCGLTNS NYTELAQLYE KYKGHGFEIL AFPCNQFGNQ EPGTNEEIVQ FACTRFKAEY PIFDKVDVNG DKAAPVYKFL KSSKGGLFGD GIKWNFAKFL
201: VDKDGNVVDR FAPTTSPLSI EKDVKKLLGV TA

Arabidopsis Description

GPX6Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O48646]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.