Factsheet for HORVU4Hr1G035380.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G070390.1
HORVU3Hr1G088110.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63080.1	HORVU1Hr1G070390.1	AT1G07000.1	21798944
AT3G63080.1	HORVU3Hr1G088110.3	AT1G07000.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G162000.1	Wheat	plastid	85.71	93.05
TraesCS4B01G152800.1	Wheat	cytosol	85.71	93.05
TraesCS4A01G142000.1	Wheat	cytosol	77.34	91.28
Os03t0358100-01	Rice	plasma membrane	75.86	91.12
Zm00001d047448_P002	Maize	extracellular, mitochondrion, plasma membrane	75.86	90.59
CDY66093	Canola	cytosol	63.55	75.88
Bra004409.1-P	Field mustard	cytosol	63.05	75.29
CDX80153	Canola	cytosol	63.05	75.29
CDX80155	Canola	cytosol	63.05	75.29
CDY72064	Canola	cytosol	64.04	74.71
AT2G48150.1	Thale cress	cytosol	62.56	74.71
CDY27457	Canola	cytosol	51.72	73.94
KXG39330	Sorghum	cytosol	71.43	73.23
GSMUA_Achr5P07930_001	Banana	cytosol	60.59	72.35
VIT_07s0104g00320.t01	Wine grape	cytosol	58.62	70.0
Solyc09g064850.2.1	Tomato	nucleus	58.62	70.0
KRH67169	Soybean	cytosol	58.62	70.0
CDX79424	Canola	cytosol	60.59	69.89
CDX67915	Canola	cytosol	60.1	69.32
AT3G63080.1	Thale cress	cytosol	58.62	68.79
KRG95489	Soybean	cytosol	56.65	66.47
CDX89171	Canola	cytosol	58.13	66.29
CDY15038	Canola	cytosol	60.59	65.78
CDX93937	Canola	cytosol	58.13	64.84
KRH71458	Soybean	endoplasmic reticulum	53.69	64.12
HORVU2Hr1G123750.1	Barley	cytosol	52.71	62.57
KRH31991	Soybean	cytosol	52.22	62.35
Bra021456.1-P	Field mustard	cytosol	60.1	59.51
Bra003522.1-P	Field mustard	cytosol	58.13	49.79
HORVU6Hr1G063830.2	Barley	plastid	54.68	46.84
HORVU7Hr1G030810.1	Barley	plastid	51.23	39.54

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	UniProt:A0A287NT84	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0004602	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0055114	GO:GO:0098869	InterPro:GPX_AS	InterPro:GPX_CS	InterPro:Glutathione_peroxidase
EnsemblPlantsGene:HORVU4Hr1G035380	EnsemblPlants:HORVU4Hr1G035380.1	InterPro:IPR000889	PFAM:PF00255	PIRSF:PIRSF000303	PRINTS:PR01011
ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355	PANTHER:PTHR11592	PANTHER:PTHR11592:SF17	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI000B468ED9	SEG:seg	:	:	:

Description

Glutathione peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A287NT84]

Coordinates

chrchr4H:-:260927786..260951372

Molecular Weight (calculated)

23121.4 Da

IEP (calculated)

9.138

GRAVY (calculated)

-0.694

Length

203 amino acids

Sequence
(BLAST)

001: LFKEKTRSNS TKDSGGLPPS RRRREGEMGA AESVPETSVH EFTVKDCNGK EVCLDTYKGK VLLIVNVASK CGFTETNYTQ LTELYQKYRE KDFEILAFPC
101: NQFLRQEPGS DQQIQDFACT RFKAEYPVFQ KVRVNGPDAA PLYKFLKASK PGLFGSRIKW NFTKFLVDKN GKVINRYATA TTPFSFEKDI QKALEEEPAD
201: SQK

Best Arabidopsis Sequence Match ( AT2G48150.1 )
(BLAST)

001: MGASASVPER SVHQFTVKDS SGKDLNMSIY QGKVLLIVNV ASKCGFTETN YTQLTELYRK YKDQDFEILA FPCNQFLYQE PGTSQEAHEF ACERFKAEYP
101: VFQKVRVNGQ NAAPIYKFLK ASKPTFLGSR IKWNFTKFLV GKDGLVIDRY GTMVTPLSIE KDIKKALEDA

Arabidopsis Description

GPX4Probable glutathione peroxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L910]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.