Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G162000.1 | Wheat | plastid | 98.84 | 90.91 |
| TraesCS4B01G152800.1 | Wheat | cytosol | 98.26 | 90.37 |
| Zm00001d047448_P002 | Maize | extracellular, mitochondrion, plasma membrane | 83.14 | 84.12 |
| Os03t0358100-01 | Rice | plasma membrane | 80.81 | 82.25 |
| HORVU4Hr1G035380.1 | Barley | cytosol | 91.28 | 77.34 |
| CDY66093 | Canola | cytosol | 69.19 | 70.0 |
| Bra004409.1-P | Field mustard | cytosol | 68.6 | 69.41 |
| CDX80153 | Canola | cytosol | 68.6 | 69.41 |
| CDX80155 | Canola | cytosol | 68.6 | 69.41 |
| AT2G48150.1 | Thale cress | cytosol | 68.02 | 68.82 |
| CDY72064 | Canola | cytosol | 68.6 | 67.82 |
| KXG39330 | Sorghum | cytosol | 77.91 | 67.68 |
| CDY27457 | Canola | cytosol | 55.81 | 67.61 |
| VIT_07s0104g00320.t01 | Wine grape | cytosol | 66.28 | 67.06 |
| GSMUA_Achr5P07930_001 | Banana | cytosol | 65.7 | 66.47 |
| KRH67169 | Soybean | cytosol | 65.7 | 66.47 |
| CDX79424 | Canola | cytosol | 67.44 | 65.91 |
| CDX67915 | Canola | cytosol | 67.44 | 65.91 |
| AT3G63080.1 | Thale cress | cytosol | 65.7 | 65.32 |
| Solyc09g064850.2.1 | Tomato | nucleus | 64.53 | 65.29 |
| KRG95489 | Soybean | cytosol | 63.95 | 63.58 |
| CDX89171 | Canola | cytosol | 65.7 | 63.48 |
| CDX93937 | Canola | cytosol | 65.12 | 61.54 |
| TraesCS2A01G582100.1 | Wheat | cytosol | 60.47 | 60.82 |
| KRH71458 | Soybean | endoplasmic reticulum | 59.88 | 60.59 |
| CDY15038 | Canola | cytosol | 65.7 | 60.43 |
| KRH31991 | Soybean | cytosol | 58.14 | 58.82 |
| Bra021456.1-P | Field mustard | cytosol | 65.12 | 54.63 |
| Bra003522.1-P | Field mustard | cytosol | 67.44 | 48.95 |
| TraesCS6A01G246400.1 | Wheat | mitochondrion, plastid | 58.14 | 42.19 |
| TraesCS7A01G150500.1 | Wheat | plastid | 55.23 | 41.48 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G142000.1 | EnsemblPlantsGene:TraesCS4A01G142000 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004602 |
| GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 | InterPro:Glutathione_peroxidase |
| InterPro:IPR000889 | InterPro:Thioredoxin-like_sf | PANTHER:PTHR11592 | PANTHER:PTHR11592:SF17 | PFAM:PF00255 | PFscan:PS51355 |
| PIRSF:PIRSF000303 | PRINTS:PR01011 | SUPFAM:SSF52833 | TIGR:cd00340 | MapMan:10.4.2 | : |
Description
No Description!
Coordinates
chr4A:+:225316703..225336076
Molecular Weight (calculated)
19675.2 Da
IEP (calculated)
7.090
GRAVY (calculated)
-0.710
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASESVLET SVHEFTVKDC NGKEVCLDTY KGKVLLIVNV ASKCGFTETN YTQLTELYQK YREKDFEILA FPCNQFLRQE PGSDQQIQDF ACTRFKAEYP
101: VFQKVRVNGP DAAPLYKFLK ANKPGLFGSR IKWNFTKFLV DKNGKKDIQK ALEEEPSDSQ TKKEEESSDS QK
101: VFQKVRVNGP DAAPLYKFLK ANKPGLFGSR IKWNFTKFLV DKNGKKDIQK ALEEEPSDSQ TKKEEESSDS QK
001: MGASASVPER SVHQFTVKDS SGKDLNMSIY QGKVLLIVNV ASKCGFTETN YTQLTELYRK YKDQDFEILA FPCNQFLYQE PGTSQEAHEF ACERFKAEYP
101: VFQKVRVNGQ NAAPIYKFLK ASKPTFLGSR IKWNFTKFLV GKDGLVIDRY GTMVTPLSIE KDIKKALEDA
101: VFQKVRVNGQ NAAPIYKFLK ASKPTFLGSR IKWNFTKFLV GKDGLVIDRY GTMVTPLSIE KDIKKALEDA
Arabidopsis Description
GPX4Probable glutathione peroxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L910]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.