Factsheet for VIT_07s0104g00320.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67169	Soybean	cytosol	81.18	81.18
KRG95489	Soybean	cytosol	81.18	79.77
Solyc09g064850.2.1	Tomato	nucleus	75.88	75.88
Zm00001d047448_P002	Maize	extracellular, mitochondrion, plasma membrane	73.53	73.53
KRH71458	Soybean	endoplasmic reticulum	73.53	73.53
KRH31991	Soybean	cytosol	72.94	72.94
AT3G63080.1	Thale cress	cytosol	74.12	72.83
CDX67915	Canola	cytosol	75.29	72.73
CDX79424	Canola	cytosol	74.71	72.16
CDX80155	Canola	cytosol	71.76	71.76
CDX80153	Canola	cytosol	71.76	71.76
Bra004409.1-P	Field mustard	cytosol	71.76	71.76
CDY66093	Canola	cytosol	71.76	71.76
Os03t0358100-01	Rice	plasma membrane	70.0	70.41
CDY72064	Canola	cytosol	71.76	70.11
AT2G48150.1	Thale cress	cytosol	70.0	70.0
GSMUA_Achr5P07930_001	Banana	cytosol	70.0	70.0
CDY27457	Canola	cytosol	57.65	69.01
CDX89171	Canola	cytosol	71.18	67.98
CDX93937	Canola	cytosol	71.18	66.48
TraesCS4A01G142000.1	Wheat	cytosol	67.06	66.28
VIT_05s0102g00120.t01	Wine grape	cytosol	64.71	65.87
VIT_02s0025g03600.t01	Wine grape	cytosol	64.12	64.5
TraesCS4B01G152800.1	Wheat	cytosol	70.59	64.17
TraesCS4D01G162000.1	Wheat	plastid	70.59	64.17
CDY15038	Canola	cytosol	69.41	63.1
KXG39330	Sorghum	cytosol	71.18	61.11
VIT_02s0025g03590.t01	Wine grape	cytosol	60.59	60.59
HORVU4Hr1G035380.1	Barley	cytosol	70.0	58.62
Bra021456.1-P	Field mustard	cytosol	68.24	56.59
Bra003522.1-P	Field mustard	cytosol	72.35	51.9
VIT_04s0008g06780.t01	Wine grape	plastid	61.76	42.68

Protein Annotations

MapMan:10.4.2	EntrezGene:100242497	wikigene:100242497	Gene3D:3.40.30.10	ProteinID:CBI32352	ProteinID:CBI32352.3
UniProt:D7TPC9	EMBL:FN596005	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0004602
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0055114	GO:GO:0098869	InterPro:GPX_AS	InterPro:GPX_CS	InterPro:Glutathione_peroxidase	InterPro:IPR000889
EntrezGene:LOC100242497	wikigene:LOC100242497	PFAM:PF00255	PIRSF:PIRSF000303	PRINTS:PR01011	ScanProsite:PS00460
ScanProsite:PS00763	PFscan:PS51355	PANTHER:PTHR11592	PANTHER:PTHR11592:SF17	SUPFAM:SSF52833	TIGR:TC54272
TIGR:TC62176	InterPro:Thioredoxin-like_sf	UniParc:UPI00015CB1A1	ArrayExpress:VIT_07s0104g00320	EnsemblPlantsGene:VIT_07s0104g00320	EnsemblPlants:VIT_07s0104g00320.t01
unigene:Vvi.633	RefSeq:XP_002276256	RefSeq:XP_002276256.1	:	:	:

Description

Glutathione peroxidase [Source:UniProtKB/TrEMBL;Acc:D7TPC9]

Coordinates

chr7:-:1577541..1583210

Molecular Weight (calculated)

19086.8 Da

IEP (calculated)

9.594

GRAVY (calculated)

-0.454

Length

170 amino acids

Sequence
(BLAST)

001: MGASQSGSEK SIHEFRVKDY KAKDVDLSVY KGKVLLVVNV ASKCGLTDSN YTQLTELYNK YKDRGFEILA FPCNQFLKQE PGSSEQAQEF ACTRYKAEYP
101: IFHKVRVNGP DAAPVYKFLK AHKSGFLGSR IKWNFTKFLV DKEGTVLARY GPTTAPLTIE ADIQKALGDK

Best Arabidopsis Sequence Match ( AT3G63080.1 )
(BLAST)

001: MGASSSSSVS EKSIHQFTVK DSSGKEVDLS VYQGKVLLVV NVASKCGFTE SNYTQLTELY RKYKDQGFVV LAFPCNQFLS QEPGTSEEAH QFACTRFKAE
101: YPVFQKVRVN GQNAAPVYKF LKSKKPSFLG SRIKWNFTKF LVGKDGQVID RYGTTVSPLS IQKDIEKALA QEL

Arabidopsis Description

GPX5Probable glutathione peroxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYB4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.