Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G63080.1 | CDY06667 | AT1G07000.1 | 21798944 |
| AT3G63080.1 | CDY10240 | AT1G07000.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89171 | Canola | cytosol | 95.6 | 97.75 |
| CDX67915 | Canola | cytosol | 84.62 | 87.5 |
| CDX79424 | Canola | cytosol | 83.52 | 86.36 |
| AT3G63080.1 | Thale cress | cytosol | 80.77 | 84.97 |
| CDY66093 | Canola | cytosol | 77.47 | 82.94 |
| CDY27457 | Canola | cytosol | 64.29 | 82.39 |
| CDX80153 | Canola | cytosol | 76.37 | 81.76 |
| CDX80155 | Canola | cytosol | 76.37 | 81.76 |
| CDY72064 | Canola | cytosol | 77.47 | 81.03 |
| Zm00001d047448_P002 | Maize | extracellular, mitochondrion, plasma membrane | 68.68 | 73.53 |
| Solyc09g064850.2.1 | Tomato | nucleus | 67.03 | 71.76 |
| KRH67169 | Soybean | cytosol | 67.03 | 71.76 |
| CDY15038 | Canola | cytosol | 73.63 | 71.66 |
| VIT_07s0104g00320.t01 | Wine grape | cytosol | 66.48 | 71.18 |
| Os03t0358100-01 | Rice | plasma membrane | 64.84 | 69.82 |
| GSMUA_Achr5P07930_001 | Banana | cytosol | 63.19 | 67.65 |
| KRG95489 | Soybean | cytosol | 63.74 | 67.05 |
| CDX86767 | Canola | cytosol | 61.54 | 65.5 |
| KRH71458 | Soybean | endoplasmic reticulum | 60.99 | 65.29 |
| TraesCS4A01G142000.1 | Wheat | cytosol | 61.54 | 65.12 |
| CDY70265 | Canola | cytosol | 60.44 | 64.33 |
| KRH31991 | Soybean | cytosol | 59.89 | 64.12 |
| TraesCS4D01G162000.1 | Wheat | plastid | 65.38 | 63.64 |
| TraesCS4B01G152800.1 | Wheat | cytosol | 65.38 | 63.64 |
| KXG39330 | Sorghum | cytosol | 63.74 | 58.59 |
| HORVU4Hr1G035380.1 | Barley | cytosol | 64.84 | 58.13 |
| CDY10812 | Canola | cytosol | 52.2 | 56.21 |
| CDY54730 | Canola | cytosol | 52.2 | 56.21 |
| CDX84772 | Canola | cytosol | 51.65 | 55.62 |
| CDY23931 | Canola | cytosol | 51.65 | 55.62 |
| CDY25499 | Canola | cytosol | 48.9 | 53.61 |
| CDY60808 | Canola | cytosol | 41.21 | 53.57 |
| CDY34354 | Canola | cytosol | 48.35 | 52.69 |
| CDY37628 | Canola | mitochondrion, plastid | 59.89 | 47.6 |
| CDY25288 | Canola | mitochondrion, plastid | 59.89 | 47.6 |
| CDX83486 | Canola | endoplasmic reticulum | 50.55 | 46.7 |
| CDY44221 | Canola | endoplasmic reticulum | 50.55 | 46.7 |
| CDX72332 | Canola | plastid | 54.95 | 43.1 |
| CDY01168 | Canola | plastid | 54.95 | 43.1 |
| CDY13458 | Canola | plastid | 54.95 | 43.1 |
| CDY69660 | Canola | plastid | 52.75 | 41.2 |
| CDX76773 | Canola | plastid | 50.0 | 37.76 |
| CDY07183 | Canola | plastid | 20.88 | 30.4 |
Protein Annotations
| MapMan:10.4.2 | Gene3D:3.40.30.10 | GO:A0A078DYE1 | EnsemblPlants:CDX93937 | ProteinID:CDX93937 | ProteinID:CDX93937.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004602 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0055114 | InterPro:GPX_AS | InterPro:GPX_CS | EnsemblPlantsGene:GSBRNA2T00156763001 | InterPro:Glutathione_peroxidase |
| InterPro:IPR000889 | PFAM:PF00255 | PIRSF:PIRSF000303 | PRINTS:PR01011 | ScanProsite:PS00460 | ScanProsite:PS00763 |
| PFscan:PS51355 | PANTHER:PTHR11592 | PANTHER:PTHR11592:SF17 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI0004EABC93 |
Description
BnaC04g20960D
Coordinates
chrLK031878:-:763899..765406
Molecular Weight (calculated)
20274.3 Da
IEP (calculated)
8.291
GRAVY (calculated)
-0.181
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSLSAVSE KSIHEFTVKD SSGKEVDLSI YQGKVLLVVN VASKCGFTES NYTQLTELYQ RYKDQGFVIL AFPCNQFMYQ EPGTSQDAHA FACTRFKAEY
101: PVFQKVCVNG QNAAPVYKFL KSKKPTFFGT RIKWNFTKFL VGKDGQVIDR YGLTVPPLSI EKDIIKALGE AGDDVPSIEP LM
101: PVFQKVCVNG QNAAPVYKFL KSKKPTFFGT RIKWNFTKFL VGKDGQVIDR YGLTVPPLSI EKDIIKALGE AGDDVPSIEP LM
001: MGASSSSSVS EKSIHQFTVK DSSGKEVDLS VYQGKVLLVV NVASKCGFTE SNYTQLTELY RKYKDQGFVV LAFPCNQFLS QEPGTSEEAH QFACTRFKAE
101: YPVFQKVRVN GQNAAPVYKF LKSKKPSFLG SRIKWNFTKF LVGKDGQVID RYGTTVSPLS IQKDIEKALA QEL
101: YPVFQKVRVN GQNAAPVYKF LKSKKPSFLG SRIKWNFTKF LVGKDGQVID RYGTTVSPLS IQKDIEKALA QEL
Arabidopsis Description
GPX5Probable glutathione peroxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYB4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.