CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023978.1-P	Field mustard	plastid	100.0	100.0
CDY13458	Canola	plastid	100.0	100.0
CDX72332	Canola	plastid	99.14	99.14
AT4G31870.1	Thale cress	plastid	74.14	73.82
KRH15634	Soybean	extracellular	35.34	71.93
CDY69660	Canola	plastid	70.26	69.96
CDX86767	Canola	cytosol	49.57	67.25
CDY54730	Canola	cytosol	48.71	66.86
CDY10812	Canola	cytosol	48.71	66.86
CDY70265	Canola	cytosol	49.14	66.67
CDX84772	Canola	cytosol	48.28	66.27
CDY23931	Canola	cytosol	48.28	66.27
CDX76773	Canola	plastid	67.67	65.15
VIT_04s0008g06780.t01	Wine grape	plastid	68.53	64.63
TraesCS7B01G054400.1	Wheat	plastid	62.5	63.88
Solyc08g006720.2.1	Tomato	plastid	65.52	63.87
Os06t0185900-01	Rice	plastid	64.22	63.68
PGSC0003DMT400067601	Potato	plastid	65.09	63.45
KRH05382	Soybean	plastid	63.79	63.25
TraesCS7A01G150500.1	Wheat	plastid	62.07	62.88
TraesCS7D01G152400.1	Wheat	plastid	61.64	62.45
GSMUA_Achr7P16200_001	Banana	plastid	62.07	60.0
Zm00001d037079_P001	Maize	plastid	59.48	60.0
EER87981	Sorghum	plastid	59.05	59.05
CDY66093	Canola	cytosol	42.67	58.24
CDY27457	Canola	cytosol	35.34	57.75
CDX80153	Canola	cytosol	42.24	57.65
CDX80155	Canola	cytosol	42.24	57.65
CDX67915	Canola	cytosol	43.53	57.39
CDX79424	Canola	cytosol	43.53	57.39
CDY44221	Canola	endoplasmic reticulum	48.71	57.36
CDY72064	Canola	cytosol	42.67	56.9
CDX83486	Canola	endoplasmic reticulum	48.28	56.85
CDY25499	Canola	cytosol	40.52	56.63
CDY60808	Canola	cytosol	33.62	55.71
CDX89171	Canola	cytosol	42.67	55.62
CDY34354	Canola	cytosol	39.66	55.09
CDX93937	Canola	cytosol	43.1	54.95
CDY37628	Canola	mitochondrion, plastid	52.59	53.28
CDY25288	Canola	mitochondrion, plastid	52.59	53.28
HORVU7Hr1G030810.1	Barley	plastid	58.62	51.71
GSMUA_Achr5P24260_001	Banana	plasma membrane	65.52	51.18
CDY15038	Canola	cytosol	40.52	50.27
CDY07183	Canola	plastid	16.81	31.2

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	unigene:Bna.2249	EnsemblPlants:CDY01168	ProteinID:CDY01168	ProteinID:CDY01168.1
ProteinID:CDY13458.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0004602	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114
GO:GO:0098869	InterPro:GPX_AS	InterPro:GPX_CS	EnsemblPlantsGene:GSBRNA2T00111256001	InterPro:Glutathione_peroxidase	InterPro:IPR000889
PFAM:PF00255	PIRSF:PIRSF000303	PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355
PANTHER:PTHR11592	PANTHER:PTHR11592:SF42	GO:Q8S4V9	UniProt:Q8S4V9	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI00000A65F1	:	:	:	:	:

Description

BnaA04g06510DGlutathione peroxidase [Source:UniProtKB/TrEMBL;Acc:Q8S4V9]

Coordinates

chrLK031924:+:741134..742951

Molecular Weight (calculated)

25943.0 Da

IEP (calculated)

10.149

GRAVY (calculated)

-0.411

Length

232 amino acids

Sequence
(BLAST)

001: MASSSYAPFS AVFSGFAATK PNPPPTCSAF LVPKRRSNSR NLKNGVSLKS WNKHGFQFTS RNLSVYARAT EEKTVHDFTV KDISGKDVSL DKFKGKPLLI
101: VNVASKCGLT SSNYTELSQL YDKYRNQGFE ILAFPCNQFG GQEPESNPDI KRFVCTRFKA EFPIFDKVDV NGPSTAPIYQ FLKSKSGGFL GDLIKWNFEK
201: FLVDKKGNVV QRYPPTTSPL QIEKDIQKLL VA

Best Arabidopsis Sequence Match ( AT4G31870.1 )
(BLAST)

001: MAFSYASFST PFNGFAANPS PITSAFLGPS LRFSTRTSKT RNPSNGVSVK SSNSHRFLVK SKNFSVYARA AAEKSVHDFT VKDIDGNDVS LDKFKGKPLL
101: IVNVASRCGL TSSNYSELSQ LYEKYKNQGF EILAFPCNQF GGQEPGSNPE IKQFACTRFK AEFPIFDKVD VNGPSTAPIY KFLKSNAGGF LGDIIKWNFE
201: KFLVDKKGKV VERYPPTTSP FQIEKDIQKL LAA

Arabidopsis Description

GPX7Putative glutathione peroxidase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ54]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.