CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
endoplasmic reticulum 2
extracellular 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	endoplasmic reticulum, extracellular, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037370.1-P	Field mustard	extracellular, plastid	48.0	66.67
AT1G63460.1	Thale cress	cytosol	38.4	28.74
CDY25499	Canola	cytosol	37.6	28.31
PGSC0003DMT400012775	Potato	cytosol	36.8	27.06
CDY34354	Canola	cytosol	36.0	26.95
KRH41161	Soybean	cytosol	35.2	26.35
KRH27930	Soybean	cytosol	34.4	25.75
CDY60808	Canola	cytosol	28.8	25.71
Solyc12g056240.1.1	Tomato	cytosol	34.4	25.29
VIT_02s0025g03590.t01	Wine grape	cytosol	33.6	24.71
CDY27457	Canola	cytosol	28.0	24.65
CDX86767	Canola	cytosol	32.0	23.39
CDY70265	Canola	cytosol	31.2	22.81
CDY66093	Canola	cytosol	30.4	22.35
CDX67915	Canola	cytosol	31.2	22.16
CDX80153	Canola	cytosol	29.6	21.76
CDX80155	Canola	cytosol	29.6	21.76
CDX79424	Canola	cytosol	30.4	21.59
CDX89171	Canola	cytosol	30.4	21.35
CDX84772	Canola	cytosol	28.8	21.3
CDY54730	Canola	cytosol	28.8	21.3
CDY23931	Canola	cytosol	28.8	21.3
CDY10812	Canola	cytosol	28.8	21.3
CDY72064	Canola	cytosol	29.6	21.26
CDX93937	Canola	cytosol	30.4	20.88
CDY15038	Canola	cytosol	29.6	19.79
CDY44221	Canola	endoplasmic reticulum	30.4	19.29
CDX83486	Canola	endoplasmic reticulum	29.6	18.78
CDY25288	Canola	mitochondrion, plastid	31.2	17.03
CDY37628	Canola	mitochondrion, plastid	31.2	17.03
CDY13458	Canola	plastid	31.2	16.81
CDY01168	Canola	plastid	31.2	16.81
CDX72332	Canola	plastid	30.4	16.38
CDY69660	Canola	plastid	28.0	15.02
CDX76773	Canola	plastid	27.2	14.11
KRH77534	Soybean	cytosol, mitochondrion	3.2	5.06

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	GO:A0A078F695	EnsemblPlants:CDY07183	ProteinID:CDY07183	ProteinID:CDY07183.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004602	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00123542001	InterPro:Glutathione_peroxidase	InterPro:IPR000889	PFAM:PF00255
PANTHER:PTHR11592	PANTHER:PTHR11592:SF27	SUPFAM:SSF52833	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	UniParc:UPI0004EC8FC2
SEG:seg	:	:	:	:	:

Description

BnaCnng01980D

Coordinates

chrLK031975:-:729137..730595

Molecular Weight (calculated)

14097.5 Da

IEP (calculated)

9.199

GRAVY (calculated)

0.635

Length

125 amino acids

Sequence
(BLAST)

001: MAMTVAASTS VAVSPPSLTF LRYLLALLRF SDALPKVMKL LRYSLAVLIW STVQHVVILL SAIFFLSYGV AFCKYQYSVK LWNHLILAFP CNQGTTDPIT
101: DFVCTRFKSE FPIFHKIEVN GENIS

Best Arabidopsis Sequence Match ( AT1G63460.1 )
(BLAST)

001: MATKEPESVY ELSIEDAKGN NLALSQYKDK VLLIVNVASK CGMTNSNYTE LNELYNRYKD KGLEILAFPC NQFGDEEPGT NDQITDFVCT RFKSEFPIFN
101: KIEVNGENAS PLYKFLKKGK WGIFGDDIQW NFAKFLVDKN GQAVQRYYPT TSPLTLEHDI KNLLNIS

Arabidopsis Description

GPX8Probable glutathione peroxidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBU2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.