CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012775	Potato	cytosol	81.44	80.0
KRH27930	Soybean	cytosol	79.04	79.04
Solyc12g056240.1.1	Tomato	cytosol	80.24	78.82
VIT_02s0025g03590.t01	Wine grape	cytosol	76.65	75.29
CDY25499	Canola	cytosol	74.25	74.7
CDY34354	Canola	cytosol	74.25	74.25
AT1G63460.1	Thale cress	cytosol	74.25	74.25
KRH27931	Soybean	cytosol, endoplasmic reticulum	73.65	73.65
KRH77533	Soybean	endoplasmic reticulum, nucleus	73.65	73.65
KRH59862	Soybean	nucleus	72.46	72.89
KRH41733	Soybean	cytosol	67.07	67.47
KRG95489	Soybean	cytosol	60.48	58.38
KRH67169	Soybean	cytosol	58.68	57.65
KRH60433	Soybean	extracellular	66.47	55.22
KRH15634	Soybean	extracellular	37.13	54.39
KRH71458	Soybean	endoplasmic reticulum	55.09	54.12
KRH41160	Soybean	nucleus	72.46	53.78
KRH31991	Soybean	cytosol	54.49	53.53
KRH77534	Soybean	cytosol, mitochondrion	25.15	53.16
Os04t0683850-00	Rice	cytosol	32.93	49.55
KRH05382	Soybean	plastid	60.48	43.16
Bra037370.1-P	Field mustard	extracellular, plastid	22.16	41.11
CDY07183	Canola	plastid	26.35	35.2

Protein Annotations

MapMan:10.4.2	EntrezGene:100808523	Gene3D:3.40.30.10	EMBL:ACUP02004752	EnsemblPlantsGene:GLYMA_08G013900	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0004602	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	GO:GO:0098869	InterPro:GPX_AS
InterPro:GPX_CS	InterPro:Glutathione_peroxidase	UniProt:I1KP95	InterPro:IPR000889	EnsemblPlants:KRH41161	ProteinID:KRH41161
ProteinID:KRH41161.1	PFAM:PF00255	PIRSF:PIRSF000303	PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763
PFscan:PS51355	PANTHER:PTHR11592	PANTHER:PTHR11592:SF27	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002337E38

Description

hypothetical protein

Coordinates

chr8:+:1077536..1079540

Molecular Weight (calculated)

18961.6 Da

IEP (calculated)

4.859

GRAVY (calculated)

-0.313

Length

167 amino acids

Sequence
(BLAST)

001: MATNHSKSVF DFTVKDAKGD DVDLATYKGK VLLIVNVASK CGMTNSNYVE LNQLFEKYKD KGLEILAFPC NQFGEEEPGS NDQIQEFVCT RFKSEFPIFD
101: KIEVNGDSAC PLYKFLKSGK WGIFGDDIQW NFAKFLIDKD GQVVDRYYPT TSPLSLERDI RKLIGIV

Best Arabidopsis Sequence Match ( AT1G63460.1 )
(BLAST)

001: MATKEPESVY ELSIEDAKGN NLALSQYKDK VLLIVNVASK CGMTNSNYTE LNELYNRYKD KGLEILAFPC NQFGDEEPGT NDQITDFVCT RFKSEFPIFN
101: KIEVNGENAS PLYKFLKKGK WGIFGDDIQW NFAKFLVDKN GQAVQRYYPT TSPLTLEHDI KNLLNIS

Arabidopsis Description

GPX8Probable glutathione peroxidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBU2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.