Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- vacuole 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g056240.1.1 | Tomato | cytosol | 96.47 | 96.47 |
| PGSC0003DMT400012777 | Potato | cytosol | 82.35 | 82.35 |
| VIT_02s0025g03590.t01 | Wine grape | cytosol | 82.35 | 82.35 |
| KRH41161 | Soybean | cytosol | 80.0 | 81.44 |
| AT1G63460.1 | Thale cress | cytosol | 79.41 | 80.84 |
| CDY25499 | Canola | cytosol | 78.82 | 80.72 |
| CDY34354 | Canola | cytosol | 78.24 | 79.64 |
| KRH27930 | Soybean | cytosol | 77.65 | 79.04 |
| PGSC0003DMT400032154 | Potato | mitochondrion | 68.24 | 68.64 |
| KRH77534 | Soybean | cytosol, mitochondrion | 24.12 | 51.9 |
| Os04t0683850-00 | Rice | cytosol | 32.94 | 50.45 |
| PGSC0003DMT400067601 | Potato | plastid | 62.35 | 44.54 |
| Bra037370.1-P | Field mustard | extracellular, plastid | 23.53 | 44.44 |
| CDY07183 | Canola | plastid | 27.06 | 36.8 |
Protein Annotations
| MapMan:10.4.2 | EntrezGene:102599983 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 |
| GO:GO:0004602 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016491 | GO:GO:0055114 | GO:GO:0098869 | InterPro:GPX_AS | InterPro:GPX_CS | InterPro:Glutathione_peroxidase |
| InterPro:IPR000889 | UniProt:M1A1S0 | PFAM:PF00255 | EnsemblPlantsGene:PGSC0003DMG401004978 | PGSC:PGSC0003DMG401004978 | EnsemblPlants:PGSC0003DMT400012775 |
| PIRSF:PIRSF000303 | PRINTS:PR01011 | ScanProsite:PS00460 | ScanProsite:PS00763 | PFscan:PS51355 | PANTHER:PTHR11592 |
| PANTHER:PTHR11592:SF27 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI000295A1C8 | RefSeq:XP_006360688.1 | : |
Description
Glutathione peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG401004978]
Coordinates
chr12:-:53997183..54000167
Molecular Weight (calculated)
19476.2 Da
IEP (calculated)
4.524
GRAVY (calculated)
-0.417
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGQPEKKPQ SVYDFTLKDA IGNDVDLSIY KGKVLLIVNV ASKCGMTNSN YTELNQLYEK YKDQDLEILA FPCNQFGEEE PGTNDQILDF VCTRFKSDFP
101: IFDKIEVNGE NASPLYKFLK SGKWGIFGDD IQWNFAKFLV DKNGQVVDRY YPTTSPLTIE RDMKKLLEII
101: IFDKIEVNGE NASPLYKFLK SGKWGIFGDD IQWNFAKFLV DKNGQVVDRY YPTTSPLTIE RDMKKLLEII
001: MATKEPESVY ELSIEDAKGN NLALSQYKDK VLLIVNVASK CGMTNSNYTE LNELYNRYKD KGLEILAFPC NQFGDEEPGT NDQITDFVCT RFKSEFPIFN
101: KIEVNGENAS PLYKFLKKGK WGIFGDDIQW NFAKFLVDKN GQAVQRYYPT TSPLTLEHDI KNLLNIS
101: KIEVNGENAS PLYKFLKKGK WGIFGDDIQW NFAKFLVDKN GQAVQRYYPT TSPLTLEHDI KNLLNIS
Arabidopsis Description
GPX8Probable glutathione peroxidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBU2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.