Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g056230.1.1 | Tomato | cytosol | 98.24 | 98.24 |
| PGSC0003DMT400012775 | Potato | cytosol | 82.35 | 82.35 |
| PGSC0003DMT400032154 | Potato | mitochondrion | 69.41 | 69.82 |
| Os04t0683850-00 | Rice | cytosol | 32.94 | 50.45 |
| PGSC0003DMT400067601 | Potato | plastid | 65.29 | 46.64 |
Protein Annotations
| MapMan:10.4.2 | EntrezGene:102600306 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 |
| GO:GO:0004602 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016491 | GO:GO:0055114 | GO:GO:0098869 | InterPro:GPX_AS | InterPro:GPX_CS | InterPro:Glutathione_peroxidase |
| InterPro:IPR000889 | UniProt:M1A1S2 | PFAM:PF00255 | EnsemblPlantsGene:PGSC0003DMG402004978 | PGSC:PGSC0003DMG402004978 | EnsemblPlants:PGSC0003DMT400012777 |
| PIRSF:PIRSF000303 | PRINTS:PR01011 | ScanProsite:PS00460 | ScanProsite:PS00763 | PFscan:PS51355 | PANTHER:PTHR11592 |
| PANTHER:PTHR11592:SF27 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI000296EB2E | RefSeq:XP_006360689.1 | : |
Description
Glutathione peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG402004978]
Coordinates
chr12:-:53989476..53993626
Molecular Weight (calculated)
19258.8 Da
IEP (calculated)
5.058
GRAVY (calculated)
-0.464
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGQPEKKPE SVYDFTLKDA KGNDVDLSIY KGKVLLIVNV ASKCGLTDSN YKDLNHLHEK YKDQGLEILA FPCNQFGAQE PGSNDEIVEF ACTRFKSEFP
101: IFDKIEVNGE NTSPFYKFLK SAKWGLLGDN IQWNFAKFLV DKNGQVSDRY YPTTSPLSME RDIKVLLGIE
101: IFDKIEVNGE NTSPFYKFLK SAKWGLLGDN IQWNFAKFLV DKNGQVSDRY YPTTSPLSME RDIKVLLGIE
001: MLRSSIRLLY IRRTSPLLRS LSSSSSSSSS KRFDSAKPLF NSHRIISLPI STTGAKLSRS EHSMAASSEP KSLYDFTVKD AKGNDVDLSI YKGKVLLIVN
101: VASQCGLTNS NYTELAQLYE KYKGHGFEIL AFPCNQFGNQ EPGTNEEIVQ FACTRFKAEY PIFDKVDVNG DKAAPVYKFL KSSKGGLFGD GIKWNFAKFL
201: VDKDGNVVDR FAPTTSPLSI EKDVKKLLGV TA
101: VASQCGLTNS NYTELAQLYE KYKGHGFEIL AFPCNQFGNQ EPGTNEEIVQ FACTRFKAEY PIFDKVDVNG DKAAPVYKFL KSSKGGLFGD GIKWNFAKFL
201: VDKDGNVVDR FAPTTSPLSI EKDVKKLLGV TA
Arabidopsis Description
GPX6Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O48646]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.