Factsheet for PGSC0003DMT400067601

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g006720.2.1	Tomato	plastid	94.54	94.54
KRH15634	Soybean	extracellular	38.24	79.82
KRH05382	Soybean	plastid	70.59	71.79
VIT_04s0008g06780.t01	Wine grape	plastid	71.01	68.7
Zm00001d037079_P001	Maize	plastid	66.39	68.7
AT4G31870.1	Thale cress	plastid	66.81	68.24
TraesCS7B01G054400.1	Wheat	plastid	64.29	67.4
Bra007819.1-P	Field mustard	plastid	65.97	67.38
CDY69660	Canola	plastid	65.55	66.95
PGSC0003DMT400032154	Potato	mitochondrion	47.48	66.86
TraesCS7D01G152400.1	Wheat	plastid	64.29	66.81
EER87981	Sorghum	plastid	64.71	66.38
TraesCS7A01G150500.1	Wheat	plastid	63.87	66.38
AT2G25080.1	Thale cress	plastid	65.55	66.1
PGSC0003DMT400012777	Potato	cytosol	46.64	65.29
CDY13458	Canola	plastid	63.45	65.09
Bra023978.1-P	Field mustard	plastid	63.45	65.09
CDX72332	Canola	plastid	63.45	65.09
CDY01168	Canola	plastid	63.45	65.09
Os06t0185900-01	Rice	plastid	63.03	64.1
GSMUA_Achr7P16200_001	Banana	plastid	63.03	62.5
PGSC0003DMT400012775	Potato	cytosol	44.54	62.35
CDX76773	Canola	plastid	63.03	62.24
GSMUA_Achr5P24260_001	Banana	plasma membrane	68.49	54.88
HORVU7Hr1G030810.1	Barley	plastid	59.66	53.99

Protein Annotations

MapMan:10.4.2	EntrezGene:102591042	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0004602	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0055114	GO:GO:0098869	InterPro:GPX_AS	InterPro:GPX_CS	InterPro:Glutathione_peroxidase
InterPro:IPR000889	UniProt:M1CHJ4	PFAM:PF00255	EnsemblPlantsGene:PGSC0003DMG400026281	PGSC:PGSC0003DMG400026281	EnsemblPlants:PGSC0003DMT400067601
PIRSF:PIRSF000303	PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355	PANTHER:PTHR11592
PANTHER:PTHR11592:SF42	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00029555A6	RefSeq:XP_006357081.1	SEG:seg

Description

Glutathione peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400026281]

Coordinates

chr8:+:1894206..1899263

Molecular Weight (calculated)

26155.2 Da

IEP (calculated)

9.165

GRAVY (calculated)

-0.247

Length

238 amino acids

Sequence
(BLAST)

001: MASLSSSSVL SPICTFFSQP KLNLYCNSSS SSSYKPTCSS SKSSIFQNGL SLLTTKSCGS SLKSKNMGNT IYARAATEKT IYDFTVKDID DKDVPLSTFK
101: GKVLLIVNVA SRCGLTTSNY TELSRVYEKY KNQGLEILAF PCNQFGAQEP GSNPEIKQFA CTRFKAEFPI FDKVDVNGPN TAPVYQFLKS SAGGFLGDLV
201: KWNFEKFLVD KNGKVVERYP PTTSPLQIEK DIQKLLAA

Best Arabidopsis Sequence Match ( AT4G31870.1 )
(BLAST)

001: MAFSYASFST PFNGFAANPS PITSAFLGPS LRFSTRTSKT RNPSNGVSVK SSNSHRFLVK SKNFSVYARA AAEKSVHDFT VKDIDGNDVS LDKFKGKPLL
101: IVNVASRCGL TSSNYSELSQ LYEKYKNQGF EILAFPCNQF GGQEPGSNPE IKQFACTRFK AEFPIFDKVD VNGPSTAPIY KFLKSNAGGF LGDIIKWNFE
201: KFLVDKKGKV VERYPPTTSP FQIEKDIQKL LAA

Arabidopsis Description

GPX7Putative glutathione peroxidase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ54]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.