CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007819.1-P	Field mustard	plastid	92.53	95.71
CDY69660	Canola	plastid	92.12	95.28
AT2G25080.1	Thale cress	plastid	82.16	83.9
KRH15634	Soybean	extracellular	34.44	72.81
CDX72332	Canola	plastid	65.15	67.67
CDY13458	Canola	plastid	65.15	67.67
CDY01168	Canola	plastid	65.15	67.67
CDX86767	Canola	cytosol	47.72	67.25
VIT_04s0008g06780.t01	Wine grape	plastid	68.46	67.07
CDY70265	Canola	cytosol	47.3	66.67
KRH05382	Soybean	plastid	63.49	65.38
Solyc08g006720.2.1	Tomato	plastid	63.49	64.29
CDY54730	Canola	cytosol	44.4	63.31
CDY10812	Canola	cytosol	44.4	63.31
PGSC0003DMT400067601	Potato	plastid	62.24	63.03
TraesCS7B01G054400.1	Wheat	plastid	58.09	61.67
Os06t0185900-01	Rice	plastid	59.75	61.54
CDX84772	Canola	cytosol	42.74	60.95
CDY23931	Canola	cytosol	42.74	60.95
TraesCS7A01G150500.1	Wheat	plastid	57.68	60.7
TraesCS7D01G152400.1	Wheat	plastid	57.26	60.26
EER87981	Sorghum	plastid	56.85	59.05
Zm00001d037079_P001	Maize	plastid	56.02	58.7
GSMUA_Achr7P16200_001	Banana	plastid	58.09	58.33
CDY60808	Canola	cytosol	33.61	57.86
CDY27457	Canola	cytosol	31.95	54.23
CDY25499	Canola	cytosol	37.34	54.22
CDX80153	Canola	cytosol	38.17	54.12
CDX80155	Canola	cytosol	38.17	54.12
CDY66093	Canola	cytosol	37.76	53.53
CDY34354	Canola	cytosol	36.93	53.29
CDY72064	Canola	cytosol	38.17	52.87
CDY37628	Canola	mitochondrion, plastid	49.79	52.4
CDY25288	Canola	mitochondrion, plastid	49.79	52.4
CDX83486	Canola	endoplasmic reticulum	42.74	52.28
CDX67915	Canola	cytosol	38.17	52.27
CDX79424	Canola	cytosol	38.17	52.27
GSMUA_Achr5P24260_001	Banana	plasma membrane	63.9	51.85
CDY44221	Canola	endoplasmic reticulum	42.32	51.78
CDX89171	Canola	cytosol	37.76	51.12
HORVU7Hr1G030810.1	Barley	plastid	55.19	50.57
CDX93937	Canola	cytosol	37.76	50.0
CDY15038	Canola	cytosol	37.76	48.66
CDY07183	Canola	plastid	14.11	27.2

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	GO:A0A078CNW1	EnsemblPlants:CDX76773	ProteinID:CDX76773	ProteinID:CDX76773.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004602	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0055114	InterPro:GPX_AS	InterPro:GPX_CS	EnsemblPlantsGene:GSBRNA2T00127268001	InterPro:Glutathione_peroxidase
InterPro:IPR000889	PFAM:PF00255	PIRSF:PIRSF000303	PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763
PFscan:PS51355	PANTHER:PTHR11592	PANTHER:PTHR11592:SF42	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0004EF4580
SEG:seg	:	:	:	:	:

Description

BnaC08g33590D

Coordinates

chrLK031808:-:995458..997297

Molecular Weight (calculated)

26628.8 Da

IEP (calculated)

9.629

GRAVY (calculated)

-0.158

Length

241 amino acids

Sequence
(BLAST)

001: MASSSSYYSP LSALFDVSKP NPSLNPAAFL VPSLKFSTAI SNFANLSNGF SLKSPVNPGF LFKSRTFNVQ ARAAAEKTVH DFTVKDIDGN DVSLNKYKGK
101: VMLIVNVASR CGLTSSNYSE LSHLYEKYKS QGFEILAFPC NQFGGQEPGS NPEIKQFACT RFKAEFPIFD KVDANGPSTA PIYQFLKSNA GGFLGDLIKW
201: NFEKFLIDKK GKVVERYPPT TSPFQIEVRL TQLLPVQFIS V

Best Arabidopsis Sequence Match ( AT2G25080.1 )
(BLAST)

001: MVSMTTSSSS YGTFSTVVNS SRPNSSATFL VPSLKFSTGI SNFANLSNGF SLKSPINPGF LFKSRPFTVQ ARAAAEKTVH DFTVKDIDGK DVALNKFKGK
101: VMLIVNVASR CGLTSSNYSE LSHLYEKYKT QGFEILAFPC NQFGFQEPGS NSEIKQFACT RFKAEFPIFD KVDVNGPSTA PIYEFLKSNA GGFLGGLIKW
201: NFEKFLIDKK GKVVERYPPT TSPFQIEKDI QKLLAA

Arabidopsis Description

GPX1Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P52032]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.