CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	mitochondrion, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037079_P001	Maize	plastid	95.69	96.52
TraesCS7B01G054400.1	Wheat	plastid	77.59	79.3
TraesCS7D01G152400.1	Wheat	plastid	78.02	79.04
TraesCS7A01G150500.1	Wheat	plastid	78.02	79.04
KRH15634	Soybean	extracellular	38.36	78.07
Os06t0185900-01	Rice	plastid	75.43	74.79
EES11249	Sorghum	cytosol	51.72	71.43
KXG31059	Sorghum	cytosol	38.36	65.44
VIT_04s0008g06780.t01	Wine grape	plastid	68.97	65.04
HORVU7Hr1G030810.1	Barley	plastid	73.71	65.02
Solyc08g006720.2.1	Tomato	plastid	66.38	64.71
PGSC0003DMT400067601	Potato	plastid	66.38	64.71
AT4G31870.1	Thale cress	plastid	64.22	63.95
KRH05382	Soybean	plastid	63.79	63.25
AT2G25080.1	Thale cress	plastid	63.36	62.29
CDY69660	Canola	plastid	62.5	62.23
Bra007819.1-P	Field mustard	plastid	62.07	61.8
GSMUA_Achr7P16200_001	Banana	plastid	63.79	61.67
EES11677	Sorghum	cytosol	45.26	61.4
CDY13458	Canola	plastid	59.05	59.05
CDY01168	Canola	plastid	59.05	59.05
Bra023978.1-P	Field mustard	plastid	59.05	59.05
CDX72332	Canola	plastid	58.62	58.62
CDX76773	Canola	plastid	59.05	56.85
KXG39415	Sorghum	plastid	48.28	56.28
GSMUA_Achr5P24260_001	Banana	plasma membrane	71.55	55.89
OQU83353	Sorghum	endoplasmic reticulum	48.28	54.63
KXG39330	Sorghum	cytosol	43.97	51.52

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	EntrezGene:8065427	UniProt:C5Z5U2	EnsemblPlants:EER87981	ProteinID:EER87981
ProteinID:EER87981.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0004602	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114
GO:GO:0098869	InterPro:GPX_AS	InterPro:GPX_CS	InterPro:Glutathione_peroxidase	InterPro:IPR000889	PFAM:PF00255
PIRSF:PIRSF000303	PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355	PANTHER:PTHR11592
PANTHER:PTHR11592:SF42	EnsemblPlantsGene:SORBI_3010G067100	SUPFAM:SSF52833	unigene:Sbi.11252	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A89194
RefSeq:XP_002436614.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:5381291..5386950

Molecular Weight (calculated)

24984.8 Da

IEP (calculated)

9.983

GRAVY (calculated)

-0.146

Length

232 amino acids

Sequence
(BLAST)

001: MAPAFTSLLP AATSAAAATA SRLPSAAAGA ASTFARLPHH PTGWAGASVA APRTAAARRR APGVAYATAA TDKSIYDYTV KDIDGKDVPL KKFKNKVLLI
101: VNVASQCGLT TANYTELSHI YEKYKTQGFE ILAFPCNQFG AQEPGSNTQI KQFACTRFKA EFPIFDKVDV NGPNTAPIYK FLKSSAGGFL GDLVKWNFEK
201: FLVDKNGKVI ERYPPTTSPF QIEKDIQKLL AA

Best Arabidopsis Sequence Match ( AT2G25080.1 )
(BLAST)

001: MVSMTTSSSS YGTFSTVVNS SRPNSSATFL VPSLKFSTGI SNFANLSNGF SLKSPINPGF LFKSRPFTVQ ARAAAEKTVH DFTVKDIDGK DVALNKFKGK
101: VMLIVNVASR CGLTSSNYSE LSHLYEKYKT QGFEILAFPC NQFGFQEPGS NSEIKQFACT RFKAEFPIFD KVDVNGPSTA PIYEFLKSNA GGFLGGLIKW
201: NFEKFLIDKK GKVVERYPPT TSPFQIEKDI QKLLAA

Arabidopsis Description

GPX1Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P52032]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.