Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EES05647 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G11600.1 | EES05647 | AT3G27960.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029089_P001 | Maize | cytosol | 71.36 | 85.54 |
| EES11249 | Sorghum | cytosol | 68.84 | 81.55 |
| TraesCS6D01G228800.1 | Wheat | cytosol | 68.84 | 81.07 |
| Zm00001d029085_P001 | Maize | plastid | 48.74 | 79.51 |
| TraesCS6B01G278100.1 | Wheat | cytosol | 64.82 | 76.33 |
| Bra035211.1-P | Field mustard | cytosol | 64.32 | 74.85 |
| CDX86767 | Canola | cytosol | 64.32 | 74.85 |
| CDY70265 | Canola | cytosol | 63.82 | 74.27 |
| KXG31059 | Sorghum | cytosol | 50.75 | 74.26 |
| EES11677 | Sorghum | cytosol | 58.79 | 68.42 |
| Os02t0664000-01 | Rice | extracellular | 69.35 | 57.98 |
| TraesCS6A01G246400.1 | Wheat | mitochondrion, plastid | 68.84 | 57.81 |
| Bra033140.1-P | Field mustard | mitochondrion, plastid | 66.33 | 57.64 |
| CDY37628 | Canola | mitochondrion, plastid | 66.33 | 57.64 |
| CDY25288 | Canola | mitochondrion, plastid | 66.33 | 57.64 |
| HORVU6Hr1G063830.2 | Barley | plastid | 68.34 | 57.38 |
| AT4G11600.1 | Thale cress | mitochondrion | 66.33 | 56.9 |
| OQU83353 | Sorghum | endoplasmic reticulum | 56.28 | 54.63 |
| KXG39330 | Sorghum | cytosol | 50.75 | 51.01 |
| EER87981 | Sorghum | plastid | 56.28 | 48.28 |
Protein Annotations
| MapMan:10.4.2 | Gene3D:3.40.30.10 | UniProt:A0A1B6QND5 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 |
| GO:GO:0004602 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016491 | GO:GO:0055114 | GO:GO:0098869 | InterPro:GPX_AS | InterPro:GPX_CS | InterPro:Glutathione_peroxidase |
| InterPro:IPR000889 | EnsemblPlants:KXG39415 | ProteinID:KXG39415 | ProteinID:KXG39415.1 | PFAM:PF00255 | PIRSF:PIRSF000303 |
| PRINTS:PR01011 | ScanProsite:PS00460 | ScanProsite:PS00763 | PFscan:PS51355 | PANTHER:PTHR11592 | PANTHER:PTHR11592:SF42 |
| EnsemblPlantsGene:SORBI_3001G378700 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI00081AD6BB | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:-:66709544..66713051
Molecular Weight (calculated)
21991.3 Da
IEP (calculated)
7.948
GRAVY (calculated)
-0.178
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPHASASAS PRSGGILRSL AGELELCEFT QQSIMAAASS LHDFIVKDAS GKDVHLSTYK GKVLLIVNVA SKCGLTNSNY TELTQLYEMY KDQGFEILAF
101: PCNQFGGQEP ATSEEIVQFV CTRFTAKFPI FDKVDVNGED AAPIYKFLKS SKTGPFGENI KWNFAKFLVD KKGHVIERYA PTTYPLSIQK DIKKLLGSY
101: PCNQFGGQEP ATSEEIVQFV CTRFTAKFPI FDKVDVNGED AAPIYKFLKS SKTGPFGENI KWNFAKFLVD KKGHVIERYA PTTYPLSIQK DIKKLLGSY
001: MLRSSIRLLY IRRTSPLLRS LSSSSSSSSS KRFDSAKPLF NSHRIISLPI STTGAKLSRS EHSMAASSEP KSLYDFTVKD AKGNDVDLSI YKGKVLLIVN
101: VASQCGLTNS NYTELAQLYE KYKGHGFEIL AFPCNQFGNQ EPGTNEEIVQ FACTRFKAEY PIFDKVDVNG DKAAPVYKFL KSSKGGLFGD GIKWNFAKFL
201: VDKDGNVVDR FAPTTSPLSI EKDVKKLLGV TA
101: VASQCGLTNS NYTELAQLYE KYKGHGFEIL AFPCNQFGNQ EPGTNEEIVQ FACTRFKAEY PIFDKVDVNG DKAAPVYKFL KSSKGGLFGD GIKWNFAKFL
201: VDKDGNVVDR FAPTTSPLSI EKDVKKLLGV TA
Arabidopsis Description
GPX6Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O48646]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.