Factsheet for Zm00001d029089_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d017793_P001
Zm00001d051589_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G11600.1	Zm00001d017793_P001	AT3G27960.1	21798944
AT4G11600.1	Zm00001d051589_P001	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029085_P001	Maize	plastid	69.28	94.26
Zm00001d002704_P001	Maize	cytosol	79.52	78.57
TraesCS6D01G228800.1	Wheat	cytosol	78.31	76.92
CDY70265	Canola	cytosol	75.9	73.68
TraesCS6B01G278100.1	Wheat	cytosol	74.7	73.37
Bra035211.1-P	Field mustard	cytosol	75.3	73.1
CDX86767	Canola	cytosol	75.3	73.1
Zm00001d026154_P002	Maize	cytosol	75.9	71.59
KXG39415	Sorghum	plastid	85.54	71.36
Zm00001d047448_P002	Maize	extracellular, mitochondrion, plasma membrane	60.24	58.82
Os02t0664000-01	Rice	extracellular	79.52	55.46
HORVU6Hr1G063830.2	Barley	plastid	78.31	54.85
Bra033140.1-P	Field mustard	mitochondrion, plastid	75.3	54.59
CDY37628	Canola	mitochondrion, plastid	75.3	54.59
CDY25288	Canola	mitochondrion, plastid	75.3	54.59
TraesCS6A01G246400.1	Wheat	mitochondrion, plastid	77.71	54.43
Zm00001d051392_P001	Maize	mitochondrion	79.52	53.66
AT4G11600.1	Thale cress	mitochondrion	74.1	53.02
Zm00001d037079_P001	Maize	plastid	62.65	45.22

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	UniProt:A0A1D6K2F9	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0004602	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0055114	GO:GO:0098869	InterPro:GPX_AS	InterPro:GPX_CS	InterPro:Glutathione_peroxidase
InterPro:IPR000889	ProteinID:ONL97871.1	PFAM:PF00255	PIRSF:PIRSF000303	PRINTS:PR01011	ScanProsite:PS00460
ScanProsite:PS00763	PFscan:PS51355	PANTHER:PTHR11592	PANTHER:PTHR11592:SF42	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI000221404F	EnsemblPlantsGene:Zm00001d029089	EnsemblPlants:Zm00001d029089_P001	EnsemblPlants:Zm00001d029089_T001	:	:

Description

Probable phospholipid hydroperoxide glutathione peroxidase 6 mitochondrial

Coordinates

chr1:+:57482407..57483912

Molecular Weight (calculated)

18350.9 Da

IEP (calculated)

7.041

GRAVY (calculated)

-0.248

Length

166 amino acids

Sequence
(BLAST)

001: MAAASSVHGF TVKDASGEDV HLSTFKGKVL LIVNVASQCG LTNSNYTELA QLHEMYKDQD FEILAFPCNQ FGGQEPGTSE EIVQLVCARF KAKYPILHKV
101: DVNGEDAAPI YKFLKSSKTG PMGEDIKWNF AKFLVDRQGH VAERYAPTTY PLSIQKDIKK LLGGSY

Best Arabidopsis Sequence Match ( AT1G63460.1 )
(BLAST)

001: MATKEPESVY ELSIEDAKGN NLALSQYKDK VLLIVNVASK CGMTNSNYTE LNELYNRYKD KGLEILAFPC NQFGDEEPGT NDQITDFVCT RFKSEFPIFN
101: KIEVNGENAS PLYKFLKKGK WGIFGDDIQW NFAKFLVDKN GQAVQRYYPT TSPLTLEHDI KNLLNIS

Arabidopsis Description

GPX8Probable glutathione peroxidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBU2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.