Factsheet for Bra035211.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86767	Canola	cytosol	100.0	100.0
CDY70265	Canola	cytosol	98.83	98.83
EES11249	Sorghum	cytosol	85.96	87.5
Zm00001d002704_P001	Maize	cytosol	85.96	87.5
TraesCS6D01G228800.1	Wheat	cytosol	84.8	85.8
TraesCS2D01G407700.1	Wheat	cytosol	83.04	84.52
TraesCS2B01G429100.1	Wheat	golgi, plastid	83.04	84.52
Os04t0556300-01	Rice	plastid	82.46	83.93
TraesCS6B01G278100.1	Wheat	cytosol	80.7	81.66
Zm00001d026154_P002	Maize	cytosol	81.87	79.55
Zm00001d029089_P001	Maize	cytosol	73.1	75.3
KXG31059	Sorghum	cytosol	59.65	75.0
Bra033140.1-P	Field mustard	mitochondrion, plastid	93.57	69.87
Zm00001d029085_P001	Maize	plastid	49.71	69.67
Bra004409.1-P	Field mustard	cytosol	66.08	66.47
Bra018232.1-P	Field mustard	cytosol	64.91	65.68
Bra022853.1-P	Field mustard	cytosol	64.33	65.09
KXG39415	Sorghum	plastid	74.85	64.32
HORVU6Hr1G063830.2	Barley	plastid	85.96	62.03
TraesCS6A01G246400.1	Wheat	mitochondrion, plastid	84.21	60.76
Os02t0664000-01	Rice	extracellular	83.63	60.08
Zm00001d051392_P001	Maize	mitochondrion	84.21	58.54
Bra000302.1-P	Field mustard	endoplasmic reticulum	66.08	57.36
Bra021456.1-P	Field mustard	cytosol	63.16	52.68
Bra007819.1-P	Field mustard	plastid	69.01	50.64
Bra023978.1-P	Field mustard	plastid	67.25	49.57
Bra003522.1-P	Field mustard	cytosol	64.33	46.41
Bra037370.1-P	Field mustard	extracellular, plastid	21.05	40.0

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra035211	EnsemblPlants:Bra035211.1	EnsemblPlants:Bra035211.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0004602	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	GO:GO:0098869	InterPro:GPX_AS
InterPro:GPX_CS	InterPro:Glutathione_peroxidase	InterPro:IPR000889	UniProt:M4F2B3	PFAM:PF00255	PIRSF:PIRSF000303
PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355	PANTHER:PTHR11592	PANTHER:PTHR11592:SF42
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002546934	SEG:seg	:	:

Description

AT4G11600 (E=5e-080) ATGPX6, PHGPX, LSC803 | ATGPX6 (GLUTATHIONE PEROXIDASE 6); glutathione peroxidase

Coordinates

chrA08:-:9166209..9167406

Molecular Weight (calculated)

18789.3 Da

IEP (calculated)

8.435

GRAVY (calculated)

-0.280

Length

171 amino acids

Sequence
(BLAST)

001: MAAATSSSPK SVHDFTVKDA KGNEVDLSIY KGKVLLIVNV ASQCGLTNSN YTELAQLYQK YKDHGFEILA FPCNQFGNQE PGSNEEIVQF ACTRFKAEYP
101: IFDKVDVNGD KAAPIYKFLK SSKGGLFGSG IKWNFSKFLV DKDGNVVDRY APTTSPLSIE KDLKKLLGVT A

Best Arabidopsis Sequence Match ( AT4G11600.1 )
(BLAST)

001: MLRSSIRLLY IRRTSPLLRS LSSSSSSSSS KRFDSAKPLF NSHRIISLPI STTGAKLSRS EHSMAASSEP KSLYDFTVKD AKGNDVDLSI YKGKVLLIVN
101: VASQCGLTNS NYTELAQLYE KYKGHGFEIL AFPCNQFGNQ EPGTNEEIVQ FACTRFKAEY PIFDKVDVNG DKAAPVYKFL KSSKGGLFGD GIKWNFAKFL
201: VDKDGNVVDR FAPTTSPLSI EKDVKKLLGV TA

Arabidopsis Description

GPX6Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O48646]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.