Factsheet for Bra004409.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80155	Canola	cytosol	100.0	100.0
CDX80153	Canola	cytosol	100.0	100.0
AT2G48150.1	Thale cress	cytosol	92.35	92.35
Bra021456.1-P	Field mustard	cytosol	91.76	76.1
Zm00001d047448_P002	Maize	extracellular, mitochondrion, plasma membrane	75.88	75.88
Os03t0358100-01	Rice	plasma membrane	72.94	73.37
KRH67169	Soybean	cytosol	72.94	72.94
Solyc09g064850.2.1	Tomato	nucleus	72.35	72.35
GSMUA_Achr5P07930_001	Banana	cytosol	71.76	71.76
VIT_07s0104g00320.t01	Wine grape	cytosol	71.76	71.76
KRG95489	Soybean	cytosol	71.76	70.52
TraesCS4D01G162000.1	Wheat	plastid	75.88	68.98
TraesCS4B01G152800.1	Wheat	cytosol	75.88	68.98
TraesCS4A01G142000.1	Wheat	cytosol	69.41	68.6
KRH71458	Soybean	endoplasmic reticulum	67.06	67.06
KRH31991	Soybean	cytosol	66.47	66.47
Bra035211.1-P	Field mustard	cytosol	66.47	66.08
HORVU4Hr1G035380.1	Barley	cytosol	75.29	63.05
KXG39330	Sorghum	cytosol	71.18	61.11
Bra022853.1-P	Field mustard	cytosol	58.82	59.17
Bra018232.1-P	Field mustard	cytosol	58.82	59.17
Bra003522.1-P	Field mustard	cytosol	80.59	57.81
Bra000302.1-P	Field mustard	endoplasmic reticulum	54.71	47.21
Bra033140.1-P	Field mustard	mitochondrion, plastid	63.53	47.16
Bra023978.1-P	Field mustard	plastid	57.65	42.24
Bra007819.1-P	Field mustard	plastid	57.65	42.06
Bra037370.1-P	Field mustard	extracellular, plastid	19.41	36.67

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra004409	EnsemblPlants:Bra004409.1	EnsemblPlants:Bra004409.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0004602	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	GO:GO:0098869	InterPro:GPX_AS
InterPro:GPX_CS	InterPro:Glutathione_peroxidase	InterPro:IPR000889	UniProt:M4CJM5	PFAM:PF00255	PIRSF:PIRSF000303
PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355	PANTHER:PTHR11592	PANTHER:PTHR11592:SF17
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002547EF9	:	:	:

Description

AT2G48150 (E=6e-090) ATGPX4 | ATGPX4 (GLUTATHIONE PEROXIDASE 4); glutathione peroxidase

Coordinates

chrA05:-:3861..4933

Molecular Weight (calculated)

19213.0 Da

IEP (calculated)

9.298

GRAVY (calculated)

-0.311

Length

170 amino acids

Sequence
(BLAST)

001: MGASVSVPER SVHQFTVKDS SGKDVNLSIY QGKVLLLVNV ASKCGFTESN YTQLTELYRK YKDQGFEILA FPCNQFLYQE PGTSQEAHEF ACTRFQAEYP
101: VFQKVRVNGQ NAAPLYKFLK ASKPTFLGSR IKWNFTKFLV SKDGIVIDRY GTMATPLSIE KDIKKALEEA

Best Arabidopsis Sequence Match ( AT2G48150.1 )
(BLAST)

001: MGASASVPER SVHQFTVKDS SGKDLNMSIY QGKVLLIVNV ASKCGFTETN YTQLTELYRK YKDQDFEILA FPCNQFLYQE PGTSQEAHEF ACERFKAEYP
101: VFQKVRVNGQ NAAPIYKFLK ASKPTFLGSR IKWNFTKFLV GKDGLVIDRY GTMVTPLSIE KDIKKALEDA

Arabidopsis Description

GPX4Probable glutathione peroxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L910]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.