Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G162000.1 | Wheat | plastid | 99.47 | 99.47 |
| TraesCS4A01G142000.1 | Wheat | cytosol | 90.37 | 98.26 |
| Os03t0358100-01 | Rice | plasma membrane | 81.82 | 90.53 |
| Zm00001d047448_P002 | Maize | extracellular, mitochondrion, plasma membrane | 81.82 | 90.0 |
| HORVU4Hr1G035380.1 | Barley | cytosol | 93.05 | 85.71 |
| CDY66093 | Canola | cytosol | 69.52 | 76.47 |
| CDX80153 | Canola | cytosol | 68.98 | 75.88 |
| CDX80155 | Canola | cytosol | 68.98 | 75.88 |
| Bra004409.1-P | Field mustard | cytosol | 68.98 | 75.88 |
| AT2G48150.1 | Thale cress | cytosol | 68.45 | 75.29 |
| CDY27457 | Canola | cytosol | 56.68 | 74.65 |
| CDY72064 | Canola | cytosol | 68.98 | 74.14 |
| KXG39330 | Sorghum | cytosol | 77.01 | 72.73 |
| GSMUA_Achr5P07930_001 | Banana | cytosol | 65.78 | 72.35 |
| VIT_07s0104g00320.t01 | Wine grape | cytosol | 64.17 | 70.59 |
| Solyc09g064850.2.1 | Tomato | nucleus | 64.17 | 70.59 |
| KRH67169 | Soybean | cytosol | 64.17 | 70.59 |
| CDX79424 | Canola | cytosol | 66.31 | 70.45 |
| CDX67915 | Canola | cytosol | 65.78 | 69.89 |
| AT3G63080.1 | Thale cress | cytosol | 64.17 | 69.36 |
| CDX89171 | Canola | cytosol | 64.17 | 67.42 |
| KRG95489 | Soybean | cytosol | 62.03 | 67.05 |
| CDY15038 | Canola | cytosol | 66.31 | 66.31 |
| CDX93937 | Canola | cytosol | 63.64 | 65.38 |
| TraesCS2B01G429100.1 | Wheat | golgi, plastid | 58.29 | 64.88 |
| KRH71458 | Soybean | endoplasmic reticulum | 58.82 | 64.71 |
| TraesCS2B01G604800.1 | Wheat | cytosol | 58.29 | 63.74 |
| KRH31991 | Soybean | cytosol | 57.22 | 62.94 |
| TraesCS6B01G278100.1 | Wheat | cytosol | 56.68 | 62.72 |
| Bra021456.1-P | Field mustard | cytosol | 65.78 | 60.0 |
| Bra003522.1-P | Field mustard | cytosol | 65.78 | 51.9 |
| TraesCS7B01G054400.1 | Wheat | plastid | 54.55 | 44.93 |
Protein Annotations
| MapMan:10.4.2 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004602 | GO:GO:0006950 |
| GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 | InterPro:GPX_AS | InterPro:GPX_CS |
| InterPro:Glutathione_peroxidase | InterPro:IPR000889 | PFAM:PF00255 | PIRSF:PIRSF000303 | PRINTS:PR01011 | ScanProsite:PS00460 |
| ScanProsite:PS00763 | PFscan:PS51355 | PANTHER:PTHR11592 | PANTHER:PTHR11592:SF17 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf |
| EnsemblPlantsGene:TraesCS4B01G152800 | EnsemblPlants:TraesCS4B01G152800.1 | TIGR:cd00340 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4B:+:256324937..256340078
Molecular Weight (calculated)
21345.1 Da
IEP (calculated)
7.091
GRAVY (calculated)
-0.664
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASESVPET SVHEFTVKDC NGKEVCLDTY KGKVLLIVNV ASKCGFTETN YTQLTELYQK YREKDFEILA FPCNQFLRQE PGSDQQIQDF ACTRFKAEYP
101: VFQKVRVNGP DAAPLYKFLK ASKPGLFGSR IKWNFTKFLV DKNGKVINRY ATATTPFSFE KDIQKALEEE PSESQTKKEE ESSDSQK
101: VFQKVRVNGP DAAPLYKFLK ASKPGLFGSR IKWNFTKFLV DKNGKVINRY ATATTPFSFE KDIQKALEEE PSESQTKKEE ESSDSQK
001: MGASASVPER SVHQFTVKDS SGKDLNMSIY QGKVLLIVNV ASKCGFTETN YTQLTELYRK YKDQDFEILA FPCNQFLYQE PGTSQEAHEF ACERFKAEYP
101: VFQKVRVNGQ NAAPIYKFLK ASKPTFLGSR IKWNFTKFLV GKDGLVIDRY GTMVTPLSIE KDIKKALEDA
101: VFQKVRVNGQ NAAPIYKFLK ASKPTFLGSR IKWNFTKFLV GKDGLVIDRY GTMVTPLSIE KDIKKALEDA
Arabidopsis Description
GPX4Probable glutathione peroxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L910]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.