CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71458	Soybean	endoplasmic reticulum	95.88	95.88
KRH67169	Soybean	cytosol	74.12	74.12
VIT_07s0104g00320.t01	Wine grape	cytosol	72.94	72.94
KRG95489	Soybean	cytosol	72.94	71.68
CDY27457	Canola	cytosol	55.88	66.9
Bra004409.1-P	Field mustard	cytosol	66.47	66.47
CDX80153	Canola	cytosol	66.47	66.47
CDX80155	Canola	cytosol	66.47	66.47
Zm00001d047448_P002	Maize	extracellular, mitochondrion, plasma membrane	65.88	65.88
CDY66093	Canola	cytosol	65.88	65.88
CDX67915	Canola	cytosol	67.65	65.34
Solyc09g064850.2.1	Tomato	nucleus	65.29	65.29
CDX79424	Canola	cytosol	67.06	64.77
AT2G48150.1	Thale cress	cytosol	64.71	64.71
CDY72064	Canola	cytosol	65.88	64.37
AT3G63080.1	Thale cress	cytosol	64.71	63.58
GSMUA_Achr5P07930_001	Banana	cytosol	63.53	63.53
Os03t0358100-01	Rice	plasma membrane	62.35	62.72
CDX89171	Canola	cytosol	64.12	61.24
KRH27931	Soybean	cytosol, endoplasmic reticulum	60.0	61.08
KRH77533	Soybean	endoplasmic reticulum, nucleus	59.41	60.48
CDX93937	Canola	cytosol	64.12	59.89
KRH41733	Soybean	cytosol	57.65	59.04
TraesCS4A01G142000.1	Wheat	cytosol	58.82	58.14
CDY15038	Canola	cytosol	63.53	57.75
KRH59862	Soybean	nucleus	55.88	57.23
TraesCS4B01G152800.1	Wheat	cytosol	62.94	57.22
TraesCS4D01G162000.1	Wheat	plastid	62.94	57.22
KRH41161	Soybean	cytosol	53.53	54.49
KXG39330	Sorghum	cytosol	61.76	53.03
KRH27930	Soybean	cytosol	51.76	52.69
HORVU4Hr1G035380.1	Barley	cytosol	62.35	52.22
Bra021456.1-P	Field mustard	cytosol	62.94	52.2
KRH15634	Soybean	extracellular	34.71	51.75
Bra003522.1-P	Field mustard	cytosol	65.29	46.84
KRH60433	Soybean	extracellular	55.29	46.77
KRH41160	Soybean	nucleus	55.29	41.78
KRH05382	Soybean	plastid	54.71	39.74
KRH77534	Soybean	cytosol, mitochondrion	17.06	36.71

Protein Annotations

MapMan:10.4.2	EntrezGene:102659700	Gene3D:3.40.30.10	EMBL:ACUP02006092	EnsemblPlantsGene:GLYMA_10G024600	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0004602	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	GO:GO:0098869	InterPro:GPX_AS
InterPro:GPX_CS	InterPro:Glutathione_peroxidase	UniProt:I1L819	InterPro:IPR000889	EnsemblPlants:KRH31991	ProteinID:KRH31991
ProteinID:KRH31991.1	PFAM:PF00255	PIRSF:PIRSF000303	PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763
PFscan:PS51355	PANTHER:PTHR11592	PANTHER:PTHR11592:SF17	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00023C9D49

Description

hypothetical protein

Coordinates

chr10:+:2165006..2168327

Molecular Weight (calculated)

19019.8 Da

IEP (calculated)

9.964

GRAVY (calculated)

-0.360

Length

170 amino acids

Sequence
(BLAST)

001: MGASQSISEN SIHEFTVKDA RGKDVNLNAY RGKVLLVINV ASKCGFADAN YSQLTQIYST YKSRGLEILA FPCNQFLKKE PGTSQEAQEF ACTRYKAEYP
101: IFGKIRVNGS DTAPVFKFLK TQKSGVMGSR IKWNFTKFLV DEEGRVIQRY SPTTKPLAIE SDIKKALQVA

Best Arabidopsis Sequence Match ( AT2G48150.1 )
(BLAST)

001: MGASASVPER SVHQFTVKDS SGKDLNMSIY QGKVLLIVNV ASKCGFTETN YTQLTELYRK YKDQDFEILA FPCNQFLYQE PGTSQEAHEF ACERFKAEYP
101: VFQKVRVNGQ NAAPIYKFLK ASKPTFLGSR IKWNFTKFLV GKDGLVIDRY GTMVTPLSIE KDIKKALEDA

Arabidopsis Description

GPX4Probable glutathione peroxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L910]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.