Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66093 | Canola | cytosol | 97.89 | 81.76 |
| CDX80153 | Canola | cytosol | 95.77 | 80.0 |
| CDX80155 | Canola | cytosol | 95.77 | 80.0 |
| CDY72064 | Canola | cytosol | 95.77 | 78.16 |
| AT2G48150.1 | Thale cress | cytosol | 90.14 | 75.29 |
| CDY15038 | Canola | cytosol | 92.96 | 70.59 |
| CDX67915 | Canola | cytosol | 83.1 | 67.05 |
| CDX79424 | Canola | cytosol | 82.39 | 66.48 |
| CDX89171 | Canola | cytosol | 81.69 | 65.17 |
| CDX93937 | Canola | cytosol | 82.39 | 64.29 |
| Zm00001d047448_P002 | Maize | extracellular, mitochondrion, plasma membrane | 75.35 | 62.94 |
| GSMUA_Achr5P07930_001 | Banana | cytosol | 72.54 | 60.59 |
| Os03t0358100-01 | Rice | plasma membrane | 71.83 | 60.35 |
| Solyc09g064850.2.1 | Tomato | nucleus | 71.83 | 60.0 |
| KRH67169 | Soybean | cytosol | 70.42 | 58.82 |
| VIT_07s0104g00320.t01 | Wine grape | cytosol | 69.01 | 57.65 |
| KRH71458 | Soybean | endoplasmic reticulum | 69.01 | 57.65 |
| KRG95489 | Soybean | cytosol | 69.72 | 57.23 |
| TraesCS4D01G162000.1 | Wheat | plastid | 74.65 | 56.68 |
| TraesCS4B01G152800.1 | Wheat | cytosol | 74.65 | 56.68 |
| KRH31991 | Soybean | cytosol | 66.9 | 55.88 |
| TraesCS4A01G142000.1 | Wheat | cytosol | 67.61 | 55.81 |
| CDX86767 | Canola | cytosol | 65.49 | 54.39 |
| CDY70265 | Canola | cytosol | 64.79 | 53.8 |
| CDY60808 | Canola | cytosol | 51.41 | 52.14 |
| HORVU4Hr1G035380.1 | Barley | cytosol | 73.94 | 51.72 |
| KXG39330 | Sorghum | cytosol | 71.13 | 51.01 |
| CDY54730 | Canola | cytosol | 57.75 | 48.52 |
| CDY23931 | Canola | cytosol | 57.75 | 48.52 |
| CDX84772 | Canola | cytosol | 57.75 | 48.52 |
| CDY10812 | Canola | cytosol | 57.75 | 48.52 |
| CDY25499 | Canola | cytosol | 52.82 | 45.18 |
| CDY34354 | Canola | cytosol | 52.11 | 44.31 |
| CDY37628 | Canola | mitochondrion, plastid | 62.68 | 38.86 |
| CDY25288 | Canola | mitochondrion, plastid | 62.68 | 38.86 |
| CDX83486 | Canola | endoplasmic reticulum | 53.52 | 38.58 |
| CDY44221 | Canola | endoplasmic reticulum | 53.52 | 38.58 |
| CDX72332 | Canola | plastid | 57.75 | 35.34 |
| CDY13458 | Canola | plastid | 57.75 | 35.34 |
| CDY01168 | Canola | plastid | 57.75 | 35.34 |
| CDY69660 | Canola | plastid | 57.75 | 35.19 |
| CDX76773 | Canola | plastid | 54.23 | 31.95 |
| CDY07183 | Canola | plastid | 24.65 | 28.0 |
Protein Annotations
| MapMan:10.4.2 | Gene3D:3.40.30.10 | GO:A0A078GQI0 | UniProt:A0A078GQI0 | EnsemblPlants:CDY27457 | ProteinID:CDY27457 |
| ProteinID:CDY27457.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 | GO:GO:0004602 | GO:GO:0006950 |
| GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0055114 |
| GO:GO:0098869 | InterPro:GPX_AS | InterPro:GPX_CS | EnsemblPlantsGene:GSBRNA2T00038101001 | InterPro:Glutathione_peroxidase | InterPro:IPR000889 |
| PFAM:PF00255 | PIRSF:PIRSF000303 | PRINTS:PR01011 | ScanProsite:PS00460 | ScanProsite:PS00763 | PFscan:PS51355 |
| PANTHER:PTHR11592 | PANTHER:PTHR11592:SF17 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI0004EDDCDA | : |
Description
BnaC04g50980DGlutathione peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A078GQI0]
Coordinates
chrLK032205:+:2398..3506
Molecular Weight (calculated)
16299.4 Da
IEP (calculated)
7.338
GRAVY (calculated)
-0.327
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTSVSVPER SVHEFTVKDS SGKDVNLSIY QGKVLLLVNV ASKCGFTESN YTQLTELYRK YKDQWFEILA FPCNQFLYQE PGTSQEAHDF ACTRFQAEYP
101: VFQKWNFTKF LVSKDGIVID RYGTMVTPLS IEKDIKKALE KA
101: VFQKWNFTKF LVSKDGIVID RYGTMVTPLS IEKDIKKALE KA
001: MVSMTTSSSS YGTFSTVVNS SRPNSSATFL VPSLKFSTGI SNFANLSNGF SLKSPINPGF LFKSRPFTVQ ARAAAEKTVH DFTVKDIDGK DVALNKFKGK
101: VMLIVNVASR CGLTSSNYSE LSHLYEKYKT QGFEILAFPC NQFGFQEPGS NSEIKQFACT RFKAEFPIFD KVDVNGPSTA PIYEFLKSNA GGFLGGLIKW
201: NFEKFLIDKK GKVVERYPPT TSPFQIEKDI QKLLAA
101: VMLIVNVASR CGLTSSNYSE LSHLYEKYKT QGFEILAFPC NQFGFQEPGS NSEIKQFACT RFKAEFPIFD KVDVNGPSTA PIYEFLKSNA GGFLGGLIKW
201: NFEKFLIDKK GKVVERYPPT TSPFQIEKDI QKLLAA
Arabidopsis Description
GPX1Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P52032]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.