CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83486	Canola	endoplasmic reticulum	97.46	97.46
AT2G43350.2	Thale cress	mitochondrion	80.71	77.18
KRH41733	Soybean	cytosol	64.47	76.51
VIT_05s0102g00120.t01	Wine grape	cytosol	63.45	74.85
CDY23931	Canola	cytosol	57.36	66.86
CDX84772	Canola	cytosol	57.36	66.86
CDX86767	Canola	cytosol	57.36	66.08
CDY70265	Canola	cytosol	57.36	66.08
CDY25499	Canola	cytosol	55.33	65.66
CDY54730	Canola	cytosol	55.84	65.09
CDY10812	Canola	cytosol	55.84	65.09
CDY34354	Canola	cytosol	54.31	64.07
KRH60433	Soybean	extracellular	63.45	62.19
CDX79424	Canola	cytosol	49.75	55.68
CDX80155	Canola	cytosol	47.72	55.29
CDX80153	Canola	cytosol	47.72	55.29
CDX67915	Canola	cytosol	49.24	55.11
CDY66093	Canola	cytosol	46.7	54.12
CDY72064	Canola	cytosol	47.72	54.02
CDY27457	Canola	cytosol	38.58	53.52
CDY25288	Canola	mitochondrion, plastid	60.91	52.4
CDY37628	Canola	mitochondrion, plastid	60.91	52.4
CDX89171	Canola	cytosol	46.7	51.69
CDX93937	Canola	cytosol	46.7	50.55
CDY13458	Canola	plastid	57.36	48.71
CDY01168	Canola	plastid	57.36	48.71
CDY60808	Canola	cytosol	34.52	48.57
CDX72332	Canola	plastid	56.85	48.28
CDY15038	Canola	cytosol	45.18	47.59
CDY69660	Canola	plastid	54.31	45.92
CDX76773	Canola	plastid	51.78	42.32
CDY07183	Canola	plastid	19.29	30.4

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	GO:A0A078I308	UniProt:A0A078I308	EnsemblPlants:CDY44221	ProteinID:CDY44221
ProteinID:CDY44221.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0004602	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114
GO:GO:0098869	InterPro:GPX_AS	InterPro:GPX_CS	EnsemblPlantsGene:GSBRNA2T00079713001	InterPro:Glutathione_peroxidase	InterPro:IPR000889
PFAM:PF00255	PIRSF:PIRSF000303	PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355
PANTHER:PTHR11592	PANTHER:PTHR11592:SF51	SUPFAM:SSF52833	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	UniParc:UPI0004EE29AA

Description

BnaC03g24130DGlutathione peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A078I308]

Coordinates

chrLK032583:-:23106..24490

Molecular Weight (calculated)

22070.9 Da

IEP (calculated)

8.566

GRAVY (calculated)

-0.083

Length

197 amino acids

Sequence
(BLAST)

001: MPRSRTCVLI LLLPLAFVFY LYMSLPSPAI VEQSSYSSIY HISVKDIEGK NVSLSKFTGK VLLIVNVASK CGLTQGNYKE LNILYAKYKT KGLEILAFPC
101: NQFGGQEPGS NKEIKENICT MFKGEFPIFD KIEVNGENAS PLYKFLKEQK GGLFGDSIKW NFAKFLVDKE GNVVDRYAPT TSPLEIEKDI EKLLSST

Best Arabidopsis Sequence Match ( AT2G43350.1 )
(BLAST)

001: MPRSSRWVNQ RATSKIKKFI LFLGVAFVFY LYRYPSSPST VEQSSTSIYN ISVKDIEGKD VSLSKFTGKV LLIVNVASKC GLTHGNYKEM NILYAKYKTQ
101: GFEILAFPCN QFGSQEPGSN MEIKETVCNI FKAEFPIFDK IEVNGKNTCP LYNFLKEQKG GLFGDAIKWN FAKFLVDRQG NVVDRYAPTT SPLEIEKDIV
201: KLLASA

Arabidopsis Description

GPX3Probable glutathione peroxidase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22850]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.