Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70265 | Canola | cytosol | 73.57 | 60.23 |
| CDX86767 | Canola | cytosol | 73.57 | 60.23 |
| Os04t0683850-00 | Rice | cytosol | 42.86 | 54.05 |
| CDY27457 | Canola | cytosol | 52.14 | 51.41 |
| CDX80153 | Canola | cytosol | 56.43 | 46.47 |
| CDX80155 | Canola | cytosol | 56.43 | 46.47 |
| CDY66093 | Canola | cytosol | 55.71 | 45.88 |
| CDY10812 | Canola | cytosol | 55.0 | 45.56 |
| CDY54730 | Canola | cytosol | 55.0 | 45.56 |
| CDY72064 | Canola | cytosol | 56.43 | 45.4 |
| CDX84772 | Canola | cytosol | 54.29 | 44.97 |
| CDY23931 | Canola | cytosol | 54.29 | 44.97 |
| CDX67915 | Canola | cytosol | 55.0 | 43.75 |
| CDX79424 | Canola | cytosol | 54.29 | 43.18 |
| CDY25499 | Canola | cytosol | 50.71 | 42.77 |
| CDY25288 | Canola | mitochondrion, plastid | 69.29 | 42.36 |
| CDY37628 | Canola | mitochondrion, plastid | 69.29 | 42.36 |
| CDX89171 | Canola | cytosol | 53.57 | 42.13 |
| CDY34354 | Canola | cytosol | 50.0 | 41.92 |
| CDY15038 | Canola | cytosol | 55.71 | 41.71 |
| CDX93937 | Canola | cytosol | 53.57 | 41.21 |
| CDY69660 | Canola | plastid | 59.29 | 35.62 |
| CDX83486 | Canola | endoplasmic reticulum | 49.29 | 35.03 |
| CDY44221 | Canola | endoplasmic reticulum | 48.57 | 34.52 |
| CDY13458 | Canola | plastid | 55.71 | 33.62 |
| CDY01168 | Canola | plastid | 55.71 | 33.62 |
| CDX72332 | Canola | plastid | 55.71 | 33.62 |
| CDX76773 | Canola | plastid | 57.86 | 33.61 |
| CDY07183 | Canola | plastid | 25.71 | 28.8 |
Protein Annotations
| MapMan:10.4.2 | Gene3D:3.40.30.10 | GO:A0A078J7T4 | UniProt:A0A078J7T4 | EnsemblPlants:CDY60808 | ProteinID:CDY60808 |
| ProteinID:CDY60808.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 | GO:GO:0004602 | GO:GO:0006950 |
| GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0055114 |
| GO:GO:0098869 | InterPro:GPX_AS | InterPro:GPX_CS | EnsemblPlantsGene:GSBRNA2T00030094001 | InterPro:Glutathione_peroxidase | InterPro:IPR000889 |
| PFAM:PF00255 | PIRSF:PIRSF000303 | PRINTS:PR01011 | ScanProsite:PS00460 | ScanProsite:PS00763 | PFscan:PS51355 |
| PANTHER:PTHR11592 | PANTHER:PTHR11592:SF42 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI0004EE2B4B | : |
Description
BnaA01g37280DGlutathione peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A078J7T4]
Coordinates
chrLK033917:-:5344..6380
Molecular Weight (calculated)
15547.3 Da
IEP (calculated)
7.383
GRAVY (calculated)
-0.180
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAATSSSPI SVHDFTVKDA RGNEVDQSIY KGKVLLIVNV ASQCGLTNSN YTELAQLYHK YKDHGFEILA FPCNQFGNQE PGSNEEIVQF ACTRFKAEYP
101: IFDKVSTFSL FLGVLTPGFS LNQLSFRGCI RFSQDASKSR
101: IFDKVSTFSL FLGVLTPGFS LNQLSFRGCI RFSQDASKSR
001: MVSMTTSSSS YGTFSTVVNS SRPNSSATFL VPSLKFSTGI SNFANLSNGF SLKSPINPGF LFKSRPFTVQ ARAAAEKTVH DFTVKDIDGK DVALNKFKGK
101: VMLIVNVASR CGLTSSNYSE LSHLYEKYKT QGFEILAFPC NQFGFQEPGS NSEIKQFACT RFKAEFPIFD KVDVNGPSTA PIYEFLKSNA GGFLGGLIKW
201: NFEKFLIDKK GKVVERYPPT TSPFQIEKDI QKLLAA
101: VMLIVNVASR CGLTSSNYSE LSHLYEKYKT QGFEILAFPC NQFGFQEPGS NSEIKQFACT RFKAEFPIFD KVDVNGPSTA PIYEFLKSNA GGFLGGLIKW
201: NFEKFLIDKK GKVVERYPPT TSPFQIEKDI QKLLAA
Arabidopsis Description
GPX1Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P52032]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.