Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60808 | Canola | cytosol | 54.05 | 42.86 |
| Os04t0556300-01 | Rice | plastid | 57.66 | 38.1 |
| KRH59862 | Soybean | nucleus | 56.76 | 37.95 |
| VIT_02s0025g03600.t01 | Wine grape | cytosol | 57.66 | 37.87 |
| KRH27931 | Soybean | cytosol, endoplasmic reticulum | 55.86 | 37.13 |
| KRH77533 | Soybean | endoplasmic reticulum, nucleus | 55.86 | 37.13 |
| KRH27930 | Soybean | cytosol | 53.15 | 35.33 |
| PGSC0003DMT400032154 | Potato | mitochondrion | 53.15 | 34.91 |
| VIT_02s0025g03590.t01 | Wine grape | cytosol | 52.25 | 34.12 |
| Solyc12g056230.1.1 | Tomato | cytosol | 50.45 | 32.94 |
| PGSC0003DMT400012777 | Potato | cytosol | 50.45 | 32.94 |
| PGSC0003DMT400012775 | Potato | cytosol | 50.45 | 32.94 |
| KRH41161 | Soybean | cytosol | 49.55 | 32.93 |
| Solyc12g056240.1.1 | Tomato | cytosol | 49.55 | 32.35 |
| Os03t0358100-01 | Rice | plasma membrane | 46.85 | 30.77 |
| AT1G63460.1 | Thale cress | cytosol | 43.24 | 28.74 |
| KRH41160 | Soybean | nucleus | 55.86 | 27.56 |
| Os02t0664000-01 | Rice | extracellular | 56.76 | 26.47 |
| Os11t0284900-01 | Rice | cytosol | 33.33 | 25.69 |
| Solyc08g080940.2.1 | Tomato | plastid | 52.25 | 24.27 |
| Bra037370.1-P | Field mustard | extracellular, plastid | 18.92 | 23.33 |
| Os06t0185900-01 | Rice | plastid | 46.85 | 22.22 |
| KRH77534 | Soybean | cytosol, mitochondrion | 7.21 | 10.13 |
Protein Annotations
| MapMan:10.4.2 | Gene3D:3.40.30.10 | UniProt:A0A0P0WGL5 | ProteinID:BAS91708.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004601 | GO:GO:0004602 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016491 | GO:GO:0055114 | GO:GO:0098869 | InterPro:GPX_CS | InterPro:Glutathione_peroxidase |
| InterPro:IPR000889 | EnsemblPlantsGene:Os04g0683850 | EnsemblPlants:Os04t0683850-00 | PFAM:PF00255 | PIRSF:PIRSF000303 | PRINTS:PR01011 |
| ScanProsite:PS00763 | PFscan:PS51355 | PANTHER:PTHR11592 | PANTHER:PTHR11592:SF37 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf |
| UniParc:UPI00039398E3 | : | : | : | : | : |
Description
Similar to Glutathione peroxidase. (Os04t0683850-00)
Coordinates
chr4:+:34920628..34922213
Molecular Weight (calculated)
12031.5 Da
IEP (calculated)
9.121
GRAVY (calculated)
-0.086
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAAESSSKL AGSIHEFTVK DARGSDVELS RYKGKVVLIV NAASRCGLTN YNYTELGQLY GKYKETGLEI LAFPCNQFAG QEPPSQAAMS RLWSLLVPAS
101: KQSILSLARL M
101: KQSILSLARL M
001: MLRSSIRLLY IRRTSPLLRS LSSSSSSSSS KRFDSAKPLF NSHRIISLPI STTGAKLSRS EHSMAASSEP KSLYDFTVKD AKGNDVDLSI YKGKVLLIVN
101: VASQCGLTNS NYTELAQLYE KYKGHGFEIL AFPCNQFGNQ EPGTNEEIVQ FACTRFKAEY PIFDKVDVNG DKAAPVYKFL KSSKGGLFGD GIKWNFAKFL
201: VDKDGNVVDR FAPTTSPLSI EKDVKKLLGV TA
101: VASQCGLTNS NYTELAQLYE KYKGHGFEIL AFPCNQFGNQ EPGTNEEIVQ FACTRFKAEY PIFDKVDVNG DKAAPVYKFL KSSKGGLFGD GIKWNFAKFL
201: VDKDGNVVDR FAPTTSPLSI EKDVKKLLGV TA
Arabidopsis Description
GPX6Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O48646]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.