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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007819.1-P Field mustard plastid 86.44 87.55
CDY69660 Canola plastid 86.44 87.55
CDX76773 Canola plastid 83.9 82.16
AT4G31870.1 Thale cress plastid 75.42 76.39
KRH15634 Soybean extracellular 36.86 76.32
VIT_04s0008g06780.t01 Wine grape plastid 72.88 69.92
KRH05382 Soybean plastid 67.8 68.38
TraesCS7B01G054400.1 Wheat plastid 63.98 66.52
Solyc08g006720.2.1 Tomato plastid 66.95 66.39
TraesCS7A01G150500.1 Wheat plastid 63.98 65.94
Os06t0185900-01 Rice plastid 65.25 65.81
PGSC0003DMT400067601 Potato plastid 66.1 65.55
TraesCS7D01G152400.1 Wheat plastid 63.14 65.07
Zm00001d037079_P001 Maize plastid 61.86 63.48
EER87981 Sorghum plastid 62.29 63.36
AT2G31570.1 Thale cress cytosol 44.92 62.72
GSMUA_Achr7P16200_001 Banana plastid 63.14 62.08
AT3G63080.1 Thale cress cytosol 41.95 57.23
AT2G48150.1 Thale cress cytosol 40.25 55.88
HORVU7Hr1G030810.1 Barley plastid 61.44 55.13
AT2G43350.2 Thale cress mitochondrion 47.03 53.88
GSMUA_Achr5P24260_001 Banana plasma membrane 67.8 53.87
AT1G63460.1 Thale cress cytosol 37.71 53.29
AT4G11600.1 Thale cress mitochondrion 51.69 52.59
Protein Annotations
MapMan:10.4.2Gene3D:3.40.30.10EntrezGene:817046ProteinID:AEC07655.1EMBL:AJ000469ArrayExpress:AT2G25080
EnsemblPlantsGene:AT2G25080RefSeq:AT2G25080TAIR:AT2G25080RefSeq:AT2G25080-TAIR-GEnsemblPlants:AT2G25080.1TAIR:AT2G25080.1
Symbol:ATGPX1EMBL:AY035153EMBL:AY063024GO:GO:0003674GO:GO:0003824GO:GO:0004601
GO:GO:0004602GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006950
GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0009507GO:GO:0009535GO:GO:0009536
GO:GO:0009570GO:GO:0009579GO:GO:0009941GO:GO:0009987GO:GO:0016020GO:GO:0016491
GO:GO:0047066GO:GO:0055114GO:GO:0098869InterPro:GPX_ASInterPro:GPX_CSInterPro:Glutathione_peroxidase
InterPro:IPR000889RefSeq:NP_180080.1UniProt:P52032PFAM:PF00255PIRSF:PIRSF000303PO:PO:0000013
PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281
PRINTS:PR01011ScanProsite:PS00460ScanProsite:PS00763PFscan:PS51355PANTHER:PTHR11592PANTHER:PTHR11592:SF42
SUPFAM:SSF52833InterPro:Thioredoxin-like_sfUniParc:UPI000012BC0FEMBL:X89866SEG:seg:
Description
GPX1Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P52032]
Coordinates
chr2:+:10667898..10670127
Molecular Weight (calculated)
26017.1 Da
IEP (calculated)
9.941
GRAVY (calculated)
-0.174
Length
236 amino acids
Sequence
(BLAST)
001: MVSMTTSSSS YGTFSTVVNS SRPNSSATFL VPSLKFSTGI SNFANLSNGF SLKSPINPGF LFKSRPFTVQ ARAAAEKTVH DFTVKDIDGK DVALNKFKGK
101: VMLIVNVASR CGLTSSNYSE LSHLYEKYKT QGFEILAFPC NQFGFQEPGS NSEIKQFACT RFKAEFPIFD KVDVNGPSTA PIYEFLKSNA GGFLGGLIKW
201: NFEKFLIDKK GKVVERYPPT TSPFQIEKDI QKLLAA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.