Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 1
- plasma membrane 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71996 | Canola | cytosol, extracellular, nucleus | 45.43 | 100.0 |
| Bra023598.1-P | Field mustard | cytosol | 89.14 | 90.7 |
| Bra035006.1-P | Field mustard | cytosol | 85.14 | 90.3 |
| Bra028932.1-P | Field mustard | cytosol | 82.0 | 83.67 |
| AT3G44300.1 | Thale cress | cytosol, peroxisome, plastid | 78.57 | 81.12 |
| AT3G44310.1 | Thale cress | plastid | 75.14 | 76.01 |
| AT3G44320.1 | Thale cress | cytosol | 72.57 | 73.41 |
| Bra020184.1-P | Field mustard | cytosol | 60.29 | 59.1 |
Protein Annotations
| Gene3D:3.60.110.10 | MapMan:9.5.2.5 | EMBL:AB254039 | ProteinID:BAG72073 | ProteinID:BAG72073.1 | EnsemblPlantsGene:Bra021681 |
| EnsemblPlants:Bra021681.1 | EnsemblPlants:Bra021681.1-P | InterPro:C-N_Hydrolase | InterPro:C-N_Hydrolase_sf | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006807 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016810 | InterPro:IPR003010 |
| InterPro:IPR036526 | UniProt:M4DYT5 | InterPro:Nitrilase/CN_hydratase_CS | PFAM:PF00795 | ScanProsite:PS00920 | ScanProsite:PS00921 |
| PFscan:PS50263 | PANTHER:PTHR23088 | PANTHER:PTHR23088:SF5 | SUPFAM:SSF56317 | UniParc:UPI0000F2A774 | SEG:seg |
Description
AT3G44300 (E=8e-160) NIT2 | NIT2 (nitrilase 2); indole-3-acetonitrile nitrilase/ indole-3-acetonitrile nitrile hydratase/ nitrilase
Coordinates
chrA04:+:13834656..13836490
Molecular Weight (calculated)
38484.9 Da
IEP (calculated)
5.448
GRAVY (calculated)
-0.163
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGSEEMSKA LNATTPGFPD IPSTIVRATI VQASTVYNDT PKTIEKAEKF IAEAASDGAQ LVVFPEAFIA GYPRGYRFGI GVGVHNEAGR DCFRRYHASA
101: IVVPGPEVDK LAEIARKYKV YLVMGAMEKD GYTLYCTALF FSSEGRFLGK HRKVMPTSLE RCIWGFGDGS TIPVYDTPLG KLGAAICWEN RMPLYRTSLY
201: GKGIELYCAP TADGSKEWQS SMMHIAIEGG CFVLSACQFC LRKDFPDHAD YLFTDWYPDQ HQEAIVSQGG SVIISPLGKI LAGPNFESEG LITADLDLGD
301: VARAKLYFDV VGHYSRPEIF NLTVNETPKK PVTFVSKSVK AEDDSEPQDK
101: IVVPGPEVDK LAEIARKYKV YLVMGAMEKD GYTLYCTALF FSSEGRFLGK HRKVMPTSLE RCIWGFGDGS TIPVYDTPLG KLGAAICWEN RMPLYRTSLY
201: GKGIELYCAP TADGSKEWQS SMMHIAIEGG CFVLSACQFC LRKDFPDHAD YLFTDWYPDQ HQEAIVSQGG SVIISPLGKI LAGPNFESEG LITADLDLGD
301: VARAKLYFDV VGHYSRPEIF NLTVNETPKK PVTFVSKSVK AEDDSEPQDK
001: MSTSENTPFN GVASSTIVRA TIVQASTVYN DTPATLEKAN KFIVEAASKG SELVVFPEAF IGGYPRGFRF GLGVGVHNEE GRDEFRKYHA SAIKVPGPEV
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK
Arabidopsis Description
NIT2NIT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V952]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.