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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • cytosol 2
  • plastid 3
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:cytosol
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:plastid
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT3G44300.1 Thale cress cytosol, peroxisome, plastid 85.55 87.32
AT3G44320.1 Thale cress cytosol 83.81 83.81
CDY36797 Canola cytosol 80.06 80.76
Bra028932.1-P Field mustard cytosol 79.77 80.47
CDY11930 Canola cytosol 78.61 79.3
CDY71996 Canola cytosol, extracellular, nucleus 36.42 79.25
Bra021681.1-P Field mustard cytosol 76.01 75.14
Bra023598.1-P Field mustard cytosol 74.28 74.71
CDY02731 Canola cytosol 73.99 73.99
CDY47302 Canola cytosol 73.7 72.86
Bra035006.1-P Field mustard cytosol 68.5 71.82
AT5G22300.1 Thale cress cytosol, peroxisome, plastid 62.72 61.13
CDY08691 Canola cytosol 73.99 56.39
Protein Annotations
Gene3D:3.60.110.10EntrezGene:823556MapMan:9.5.2.5UniProt:A0A178VJA0ProteinID:AAB05221.1EMBL:AB493638
ProteinID:AEE77887.1ProteinID:AEE77888.1ProteinID:AEE77889.1ProteinID:ANM63777.1ArrayExpress:AT3G44310EnsemblPlantsGene:AT3G44310
RefSeq:AT3G44310TAIR:AT3G44310RefSeq:AT3G44310-TAIR-GEnsemblPlants:AT3G44310.1TAIR:AT3G44310.1EMBL:AY042847
EMBL:AY084633EMBL:BT000040InterPro:C-N_HydrolaseInterPro:C-N_Hydrolase_sfUniProt:C0SVD5ProteinID:CAA68935.2
ProteinID:CAB88999.1EMBL:DQ446730GO:GO:0000257GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005576GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0005886
GO:GO:0006807GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009506GO:GO:0009507
GO:GO:0009536GO:GO:0009684GO:GO:0009987GO:GO:0016020GO:GO:0016787GO:GO:0016810
GO:GO:0048046GO:GO:0080061GO:GO:0080109InterPro:IPR003010InterPro:IPR036526Symbol:NIT1
RefSeq:NP_001078234.1RefSeq:NP_001319680.1RefSeq:NP_001325848.1RefSeq:NP_851011.1InterPro:Nitrilase/CN_hydratase_CSProteinID:OAP06490.1
UniProt:P32961PFAM:PF00795PO:PO:0000005PO:PO:0000293PO:PO:0007131PO:PO:0009025
ScanProsite:PS00920ScanProsite:PS00921PFscan:PS50263PANTHER:PTHR23088PANTHER:PTHR23088:SF5SUPFAM:SSF56317
UniParc:UPI0000001AE2EMBL:X63445SEG:seg:::
Description
NIT1Uncharacterized protein At3g44310 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVD5]
Coordinates
chr3:+:15986624..15989505
Molecular Weight (calculated)
38154.2 Da
IEP (calculated)
6.233
GRAVY (calculated)
-0.234
Length
346 amino acids
Sequence
(BLAST)
001: MSSTKDMSTV QNATPFNGVA PSTTVRVTIV QSSTVYNDTP ATIDKAEKYI VEAASKGAEL VLFPEGFIGG YPRGFRFGLA VGVHNEEGRD EFRKYHASAI
101: HVPGPEVARL ADVARKNHVY LVMGAIEKEG YTLYCTVLFF SPQGQFLGKH RKLMPTSLER CIWGQGDGST IPVYDTPIGK LGAAICWENR MPLYRTALYA
201: KGIELYCAPT ADGSKEWQSS MLHIAIEGGC FVLSACQFCQ RKHFPDHPDY LFTDWYDDKE HDSIVSQGGS VIISPLGQVL AGPNFESEGL VTADIDLGDI
301: ARAKLYFDSV GHYSRPDVLH LTVNEHPRKS VTFVTKVEKA EDDSNK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.