Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G44310.1 | Thale cress | plastid | 87.32 | 85.55 |
| CDY36797 | Canola | cytosol | 84.96 | 83.97 |
| Bra028932.1-P | Field mustard | cytosol | 84.66 | 83.67 |
| CDY71996 | Canola | cytosol, extracellular, nucleus | 39.23 | 83.65 |
| CDY11930 | Canola | cytosol | 83.78 | 82.8 |
| AT3G44320.1 | Thale cress | cytosol | 83.48 | 81.79 |
| Bra021681.1-P | Field mustard | cytosol | 81.12 | 78.57 |
| Bra023598.1-P | Field mustard | cytosol | 79.06 | 77.91 |
| CDY02731 | Canola | cytosol | 78.76 | 77.17 |
| CDY47302 | Canola | cytosol | 77.29 | 74.86 |
| Bra035006.1-P | Field mustard | cytosol | 71.68 | 73.64 |
| AT5G22300.1 | Thale cress | cytosol, peroxisome, plastid | 65.19 | 62.25 |
| CDY08691 | Canola | cytosol | 77.88 | 58.15 |
Protein Annotations
| Gene3D:3.60.110.10 | EntrezGene:823555 | MapMan:9.5.2.5 | UniProt:A0A178V952 | ProteinID:AAB05220.1 | ProteinID:AEE77886.1 |
| EMBL:AK226450 | ArrayExpress:AT3G44300 | EnsemblPlantsGene:AT3G44300 | RefSeq:AT3G44300 | TAIR:AT3G44300 | RefSeq:AT3G44300-TAIR-G |
| EnsemblPlants:AT3G44300.1 | TAIR:AT3G44300.1 | EMBL:AY088028 | Unigene:At.5404 | EMBL:BT025235 | InterPro:C-N_Hydrolase |
| InterPro:C-N_Hydrolase_sf | ProteinID:CAB88998.1 | GO:GO:0000257 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006807 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009684 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0016810 | GO:GO:0046686 | GO:GO:0080061 | GO:GO:0080109 | InterPro:IPR003010 |
| InterPro:IPR036526 | Symbol:NIT2 | RefSeq:NP_190016.1 | InterPro:Nitrilase/CN_hydratase_CS | ProteinID:OAP02780.1 | UniProt:P32962 |
| PFAM:PF00795 | PO:PO:0000005 | PO:PO:0000293 | PO:PO:0020030 | ScanProsite:PS00920 | ScanProsite:PS00921 |
| PFscan:PS50263 | PANTHER:PTHR23088 | PANTHER:PTHR23088:SF5 | UniProt:Q1LYZ1 | SUPFAM:SSF56317 | EMBL:U09958 |
| UniParc:UPI0000001444 | EMBL:X68305 | SEG:seg | : | : | : |
Description
NIT2NIT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V952]
Coordinates
chr3:+:15983199..15985535
Molecular Weight (calculated)
37155.1 Da
IEP (calculated)
5.245
GRAVY (calculated)
-0.203
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTSENTPFN GVASSTIVRA TIVQASTVYN DTPATLEKAN KFIVEAASKG SELVVFPEAF IGGYPRGFRF GLGVGVHNEE GRDEFRKYHA SAIKVPGPEV
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.