CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, nucleus
Any Predictor:	cytosol, extracellular, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021681.1-P	Field mustard	cytosol	100.0	45.43
CDY02731	Canola	cytosol	90.57	41.62
CDY47302	Canola	cytosol	89.94	40.86
CDY11930	Canola	cytosol	86.16	39.94
CDY36797	Canola	cytosol	86.16	39.94
AT3G44300.1	Thale cress	cytosol, peroxisome, plastid	83.65	39.23
AT3G44310.1	Thale cress	plastid	79.25	36.42
AT3G44320.1	Thale cress	cytosol	72.96	33.53
CDY08691	Canola	cytosol	87.42	30.62
CDY09130	Canola	cytosol	58.49	26.05
CDY35679	Canola	cytosol	56.6	25.28

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	GO:A0A078K2G9	UniProt:A0A078K2G9	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf
EnsemblPlants:CDY71996	ProteinID:CDY71996	ProteinID:CDY71996.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	EnsemblPlantsGene:GSBRNA2T00022976001	InterPro:IPR003010
InterPro:IPR036526	PFAM:PF00795	PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF5	SUPFAM:SSF56317
UniParc:UPI0004EE387B	:	:	:	:	:

Description

BnaCnng75490DBnaCnng75490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K2G9]

Coordinates

chrLK048454:+:305..1494

Molecular Weight (calculated)

17628.8 Da

IEP (calculated)

4.556

GRAVY (calculated)

-0.245

Length

159 amino acids

Sequence
(BLAST)

001: MPLYRTSLYG KGIELYCAPT ADGSKEWQSS MMHIAIEGGC FVLSACQFCL RKDFPDHADY LFTDWYPDQH QEAIVSQGGS VIISPLGKIL AGPNFESEGL
101: ITADLDLGDV ARAKLYFDVV GHYSRPEIFN LTVNETPKKP VTFVSKSVKA EDDSEPQDK

Best Arabidopsis Sequence Match ( AT3G44300.1 )
(BLAST)

001: MSTSENTPFN GVASSTIVRA TIVQASTVYN DTPATLEKAN KFIVEAASKG SELVVFPEAF IGGYPRGFRF GLGVGVHNEE GRDEFRKYHA SAIKVPGPEV
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK

Arabidopsis Description

NIT2NIT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V952]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.