CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09130	Canola	cytosol	96.07	95.8
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	85.67	85.92
PGSC0003DMT400067695	Potato	cytoskeleton, cytosol, peroxisome	77.81	78.92
Solyc11g068730.1.1	Tomato	extracellular, nucleus	77.25	78.35
KRH30383	Soybean	cytosol, nucleus	76.12	77.43
KRH25286	Soybean	cytosol	75.56	76.86
GSMUA_Achr8P13970_001	Banana	plastid	71.91	73.78
TraesCS6B01G260800.2	Wheat	cytosol	68.26	71.26
HORVU6Hr1G059740.1	Barley	cytosol	67.98	70.97
TraesCS6D01G215300.1	Wheat	cytosol	67.7	70.67
Zm00001d051214_P001	Maize	cytosol	71.07	70.08
Os02t0635200-01	Rice	plasma membrane	71.07	69.89
EES05474	Sorghum	cytosol	70.79	69.81
TraesCS6D01G215400.2	Wheat	cytosol	70.22	68.68
TraesCS6A01G232500.1	Wheat	cytosol	69.94	68.41
EES05473	Sorghum	cytosol	66.57	68.1
VIT_02s0033g00790.t01	Wine grape	cytosol, peroxisome, plastid	62.92	68.09
VIT_02s0109g00430.t01	Wine grape	cytosol, peroxisome, plastid	62.64	67.99
TraesCS6B01G260700.2	Wheat	cytosol	69.38	67.86
TraesCS6B01G261000.1	Wheat	cytosol	68.54	67.78
TraesCS6A01G232300.1	Wheat	cytosol	68.26	67.5
KXG30695	Sorghum	cytosol	68.54	67.22
VIT_02s0033g00670.t01	Wine grape	cytosol, peroxisome, plastid	62.08	67.17
VIT_02s0033g00850.t01	Wine grape	cytosol, peroxisome, plastid	54.49	67.13
Os02t0635000-01	Rice	cytosol	67.13	66.95
VIT_02s0033g00770.t01	Wine grape	cytosol, peroxisome, plastid	61.8	66.87
VIT_02s0033g00660.t01	Wine grape	cytosol, peroxisome, plastid	61.52	66.57
VIT_02s0033g00700.t01	Wine grape	cytosol, peroxisome, plastid	62.36	66.47
VIT_02s0033g00870.t01	Wine grape	cytosol, peroxisome, plastid	61.24	66.26
VIT_02s0033g00800.t01	Wine grape	cytosol, peroxisome, plastid	61.24	66.26
CDY36797	Canola	cytosol	61.52	63.85
TraesCS6A01G232400.2	Wheat	cytosol	61.24	63.37
CDY11930	Canola	cytosol	60.96	63.27
HORVU6Hr1G059760.1	Barley	cytosol	59.27	63.17
Zm00001d017352_P001	Maize	cytosol	68.82	61.4
CDY02731	Canola	cytosol	57.3	58.96
EES12535	Sorghum	cytosol	55.9	58.19
CDY47302	Canola	cytosol	56.74	57.71
CDY71996	Canola	cytosol, extracellular, nucleus	25.28	56.6
VIT_02s0033g00630.t01	Wine grape	cytosol	55.06	56.48
HORVU6Hr1G059730.3	Barley	plastid	67.98	53.9
VIT_02s0033g00840.t01	Wine grape	cytosol, extracellular	18.82	53.6
CDY08691	Canola	cytosol	57.58	45.15
TraesCS6A01G340200.1	Wheat	cytosol	16.85	32.97

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	GO:A0A078HE05	UniProt:A0A078HE05	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf
EnsemblPlants:CDY35679	ProteinID:CDY35679	ProteinID:CDY35679.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	EnsemblPlantsGene:GSBRNA2T00059082001	InterPro:IPR003010
InterPro:IPR036526	InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920	ScanProsite:PS00921	PFscan:PS50263
PANTHER:PTHR23088	PANTHER:PTHR23088:SF31	SUPFAM:SSF56317	UniParc:UPI0004EE18F6	:	:

Description

BnaC02g09450DBnaC02g09450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HE05]

Coordinates

chrLK032358:+:58665..60597

Molecular Weight (calculated)

38902.4 Da

IEP (calculated)

5.004

GRAVY (calculated)

-0.092

Length

356 amino acids

Sequence
(BLAST)

001: MSTHQQDMSL VTSTPINNGN QIFPEIEMSG DSSSIVRATV VQACTIFYDT PATLDKAERL LAEAADNGSQ LVVFPEAFIG GYPRGSSFEL AIGARTAKGR
101: DDFRKYLASA IDVPGPEVER MAEMARKYKV FLVMGVIERE GYTLYCSVLF FDSQGQFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADARETWLA SMTHIALEGG CFVLSANQFC RRKDYPPPPE YTFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYEGEA
301: LISADLDLGD IARAKFDFDV VGHYSRPEVF SLNIKEHPRK AASFTSKVTK DETVKM

Best Arabidopsis Sequence Match ( AT5G22300.1 )
(BLAST)

001: MSMQQETSHM TAAPQTNGHQ IFPEIDMSAG DSSSIVRATV VQASTVFYDT PATLDKAERL LSEAAENGSQ LVVFPEAFIG GYPRGSTFEL AIGSRTAKGR
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV

Arabidopsis Description

NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.