Factsheet for TraesCS6A01G232400.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G260800.2	Wheat	cytosol	86.34	87.1
TraesCS6D01G215300.1	Wheat	cytosol	85.17	85.92
HORVU6Hr1G059740.1	Barley	cytosol	84.3	85.04
HORVU6Hr1G059760.1	Barley	cytosol	82.27	84.73
EES05473	Sorghum	cytosol	75.87	75.0
Os02t0635000-01	Rice	cytosol	77.03	74.23
KXG30695	Sorghum	cytosol	72.97	69.15
GSMUA_Achr8P13970_001	Banana	plastid	66.86	66.28
TraesCS6A01G232300.1	Wheat	cytosol	67.73	64.72
TraesCS6A01G232500.1	Wheat	cytosol	67.44	63.74
Zm00001d017352_P001	Maize	cytosol	73.84	63.66
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	63.37	61.41
CDY35679	Canola	cytosol	63.37	61.24
CDY09130	Canola	cytosol	63.08	60.78
Bra020184.1-P	Field mustard	cytosol	62.5	60.22
VIT_06s0080g00950.t01	Wine grape	cytosol	18.6	52.89
TraesCS6A01G340200.1	Wheat	cytosol	26.16	49.45

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010
InterPro:IPR036526	InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920	ScanProsite:PS00921	PFscan:PS50263
PANTHER:PTHR23088	PANTHER:PTHR23088:SF31	SUPFAM:SSF56317	EnsemblPlantsGene:TraesCS6A01G232400	EnsemblPlants:TraesCS6A01G232400.2	TIGR:cd07564

Description

No Description!

Coordinates

chr6A:+:439754108..439757375

Molecular Weight (calculated)

37027.5 Da

IEP (calculated)

7.071

GRAVY (calculated)

-0.009

Length

344 amino acids

Sequence
(BLAST)

001: MALSPASVGP VIPEVEMNAG ADQGSTTVRA TVVQACSVFY DTPATLDKAE KLIAEAAGYG SQLVLFPEVF VGGYPHGSTF GLTIGSRSAK GKEDFRKYHA
101: AAIDVPGPEV SRLAALAGKY KVFLVIGVVE RAGYTLYNTV LSFDSLGKYL GKHRKLMPTS LERVFWGFGD GSTIPVYDTP LGKIGAVICW ENRMPLIRTA
201: MYAKGVQIYC APTADALPSW QASMTHIALE GGCFVLTANQ FCRRKDFPPS PEYTFGGHEE EPSPETAVCP GGSAIISPSG TVLAGPNYEG EALLTADLGK
301: KKPMTPKSML NTYYHFGYLY ATLEKLFEPS LISTSWDTTR ALRC

Best Arabidopsis Sequence Match ( AT3G44300.1 )
(BLAST)

001: MSTSENTPFN GVASSTIVRA TIVQASTVYN DTPATLEKAN KFIVEAASKG SELVVFPEAF IGGYPRGFRF GLGVGVHNEE GRDEFRKYHA SAIKVPGPEV
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK

Arabidopsis Description

NIT2NIT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V952]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.