CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G059740.1	Barley	cytosol	85.34	87.1
TraesCS6B01G260800.2	Wheat	cytosol	84.77	86.51
TraesCS6D01G215300.1	Wheat	cytosol	84.2	85.92
Os02t0635000-01	Rice	cytosol	83.33	81.23
KXG30695	Sorghum	cytosol	82.47	79.06
Zm00001d017352_P001	Maize	cytosol	89.66	78.2
HORVU6Hr1G059760.1	Barley	cytosol	74.71	77.84
TraesCS6A01G232400.2	Wheat	cytosol	75.0	75.87
EES05474	Sorghum	cytosol	76.72	73.96
GSMUA_Achr8P13970_001	Banana	plastid	72.99	73.2
VIT_06s0080g00950.t01	Wine grape	cytosol	23.56	67.77
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	68.68	67.32
CDY09130	Canola	cytosol	68.39	66.67
CDY35679	Canola	cytosol	68.1	66.57
Bra020184.1-P	Field mustard	cytosol	67.82	66.11
EES12535	Sorghum	cytosol	62.64	63.74

Protein Annotations

Gene3D:3.60.110.10	EntrezGene:8074792	MapMan:9.5.2.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	UniProt:C5XY70
EnsemblPlants:EES05473	ProteinID:EES05473	ProteinID:EES05473.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010	InterPro:IPR036526
InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920	ScanProsite:PS00921	PFscan:PS50263	PANTHER:PTHR23088
PANTHER:PTHR23088:SF31	EnsemblPlantsGene:SORBI_3004G225000	SUPFAM:SSF56317	unigene:Sbi.924	UniParc:UPI0001A8543C	RefSeq:XP_002452497.1

Description

hypothetical protein

Coordinates

chr4:+:57535766..57539748

Molecular Weight (calculated)

37252.6 Da

IEP (calculated)

5.411

GRAVY (calculated)

0.025

Length

348 amino acids

Sequence
(BLAST)

001: MALAPSRSGS EPVIPEVEMN AGADQAASTV RVTVVQASSV FYDTPATLDK VEKLIAEAAG YGSQLVLFPE VFVGGYPHGS TFGLVIGNRT AKGKEDFQKY
101: HASAIDVPGP EVSRLSALAG KFKVYLVIGV VERAGYTLYN TVLSFDPLGK YLGKHRKVMP TALERVFWGF GDGSTIPVYD TPLGKIGALI CWENRMPLMR
201: TAMYAKGIQI YCAPTVDCMP SWQSSMTHIA LEGGCFVLSA SQFCHRKNYP PPPEYTFGGL EEEPSPESAV CSGGSVIISP SGTVLAGPNY ESEALLTADL
301: DLGEIVRAKF DFDVVGHYSR PEVLSLVVKT DPKPAVSFTS ASEKTNAG

Best Arabidopsis Sequence Match ( AT5G22300.1 )
(BLAST)

001: MSMQQETSHM TAAPQTNGHQ IFPEIDMSAG DSSSIVRATV VQASTVFYDT PATLDKAERL LSEAAENGSQ LVVFPEAFIG GYPRGSTFEL AIGSRTAKGR
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV

Arabidopsis Description

NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.