Factsheet for VIT_06s0080g00950.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0033g00840.t01	Wine grape	cytosol, extracellular	49.59	48.0
VIT_02s0033g00850.t01	Wine grape	cytosol, peroxisome, plastid	65.29	27.34
VIT_06s0080g00940.t01	Wine grape	cytosol	77.69	27.09
GSMUA_Achr8P13970_001	Banana	plastid	71.9	25.07
Os02t0635200-01	Rice	plasma membrane	74.38	24.86
EES05474	Sorghum	cytosol	73.55	24.65
HORVU6Hr1G059740.1	Barley	cytosol	69.42	24.63
TraesCS6B01G260800.2	Wheat	cytosol	69.42	24.63
VIT_02s0109g00430.t01	Wine grape	cytosol, peroxisome, plastid	66.12	24.39
Zm00001d051214_P001	Maize	cytosol	72.73	24.38
TraesCS6D01G215300.1	Wheat	cytosol	68.59	24.34
TraesCS6A01G232300.1	Wheat	cytosol	71.9	24.17
TraesCS6A01G232500.1	Wheat	cytosol	71.9	23.9
TraesCS6B01G260700.2	Wheat	cytosol	71.9	23.9
TraesCS6D01G215400.2	Wheat	cytosol	71.9	23.9
VIT_02s0033g00870.t01	Wine grape	cytosol, peroxisome, plastid	64.46	23.71
VIT_02s0033g00660.t01	Wine grape	cytosol, peroxisome, plastid	64.46	23.71
VIT_02s0033g00670.t01	Wine grape	cytosol, peroxisome, plastid	64.46	23.71
VIT_02s0033g00770.t01	Wine grape	cytosol, peroxisome, plastid	64.46	23.71
VIT_02s0033g00790.t01	Wine grape	cytosol, peroxisome, plastid	64.46	23.71
VIT_02s0033g00800.t01	Wine grape	cytosol, peroxisome, plastid	64.46	23.71
KXG30695	Sorghum	cytosol	71.07	23.69
VIT_02s0033g00700.t01	Wine grape	cytosol, peroxisome, plastid	65.29	23.65
TraesCS6B01G261000.1	Wheat	cytosol	70.25	23.61
EES05473	Sorghum	cytosol	67.77	23.56
EES12535	Sorghum	cytosol	66.12	23.39
Os02t0635000-01	Rice	cytosol	67.77	22.97
VIT_02s0033g00630.t01	Wine grape	cytosol	61.98	21.61
Zm00001d017352_P001	Maize	cytosol	68.59	20.8
HORVU6Hr1G059730.3	Barley	plastid	71.07	19.15
HORVU6Hr1G059760.1	Barley	cytosol	52.07	18.86
TraesCS6A01G232400.2	Wheat	cytosol	52.89	18.6

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	ProteinID:CCB51629	ProteinID:CCB51629.1
UniProt:F6HHD3	EMBL:FN595757	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010	InterPro:IPR036526	PFAM:PF00795
PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF31	SUPFAM:SSF56317	UniParc:UPI0002107F78	ArrayExpress:VIT_06s0080g00950
EnsemblPlantsGene:VIT_06s0080g00950	EnsemblPlants:VIT_06s0080g00950.t01	:	:	:	:

Description

No Description!

Coordinates

chr6:-:21029342..21030552

Molecular Weight (calculated)

13045.2 Da

IEP (calculated)

4.149

GRAVY (calculated)

-0.049

Length

121 amino acids

Sequence
(BLAST)

001: MSDARETWQA SMTHIALEGG CFVLSANQFC LRKDYPPPPE YIFSGTDEDL TPDTVVCAGG SVIISPSGAV LAGPDYKGEV LITADLDIHG EIARAKFDFD
101: VVGHYSRPDV LSLWTYSTSN G

Best Arabidopsis Sequence Match ( AT5G22300.1 )
(BLAST)

001: MSMQQETSHM TAAPQTNGHQ IFPEIDMSAG DSSSIVRATV VQASTVFYDT PATLDKAERL LSEAAENGSQ LVVFPEAFIG GYPRGSTFEL AIGSRTAKGR
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV

Arabidopsis Description

NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.