Factsheet for VIT_02s0033g00670.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
plastid 2
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0033g00660.t01	Wine grape	cytosol, peroxisome, plastid	99.39	99.39
VIT_02s0033g00770.t01	Wine grape	cytosol, peroxisome, plastid	99.39	99.39
VIT_02s0033g00800.t01	Wine grape	cytosol, peroxisome, plastid	97.57	97.57
VIT_02s0033g00870.t01	Wine grape	cytosol, peroxisome, plastid	97.26	97.26
VIT_02s0033g00850.t01	Wine grape	cytosol, peroxisome, plastid	85.11	96.89
VIT_02s0033g00790.t01	Wine grape	cytosol, peroxisome, plastid	96.66	96.66
VIT_02s0033g00700.t01	Wine grape	cytosol, peroxisome, plastid	96.66	95.21
VIT_02s0109g00430.t01	Wine grape	cytosol, peroxisome, plastid	92.1	92.38
VIT_02s0033g00840.t01	Wine grape	cytosol, extracellular	34.65	91.2
VIT_02s0033g00630.t01	Wine grape	cytosol	89.36	84.73
VIT_06s0080g00940.t01	Wine grape	cytosol	70.21	66.57
VIT_06s0080g00950.t01	Wine grape	cytosol	23.71	64.46
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	67.78	62.82
CDY09130	Canola	cytosol	67.48	62.18
CDY35679	Canola	cytosol	67.17	62.08
Bra020184.1-P	Field mustard	cytosol	66.87	61.62

Protein Annotations

EntrezGene:100263621	wikigene:100263621	Gene3D:3.60.110.10	MapMan:9.5.2.5	EMBL:AM446515	InterPro:C-N_Hydrolase
InterPro:C-N_Hydrolase_sf	ProteinID:CAN67533	ProteinID:CAN67533.1	ProteinID:CBI37419	ProteinID:CBI37419.3	UniProt:D7U3V0
EMBL:FN596505	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010	InterPro:IPR036526	EntrezGene:LOC100263621	wikigene:LOC100263621
InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920	PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF31
SUPFAM:SSF56317	UniParc:UPI0001BE463E	ArrayExpress:VIT_02s0033g00670	EnsemblPlantsGene:VIT_02s0033g00670	EnsemblPlants:VIT_02s0033g00670.t01	:

Description

No Description!

Coordinates

chr2:-:15294883..15296794

Molecular Weight (calculated)

36645.5 Da

IEP (calculated)

5.090

GRAVY (calculated)

-0.238

Length

329 amino acids

Sequence
(BLAST)

001: MSSTVRATVV QASSIFYDTP ATLDKAERFL KEAAALGSQL VVFPEAFIGG YPRGYNFADQ SPRGKESFRK YHASAINVPG PEVDRLASMA AKYKVYLVTG
101: VVERDGYTLY CTVLFFDPEG NYLGKHRKLM PTYWERLFWG FGDCSTTPVY DTPYGKLGSV ICWENRMPLF RTAMYGKGIE IYCAPTADSG DTWVATMRHV
201: AIEGGCYVLS PIQFCRRKDY PPPPEYLYSP TEEDVTPDSI VWAGGSVIIS PHGEILAGPN YEGEGLFTAD LDVRGEIPKA KFQFDVVGHY SRADVLSLTV
301: NNRPLLPVTF TSSPSKIKDN EEMDECKDI

Best Arabidopsis Sequence Match ( AT5G22300.1 )
(BLAST)

001: MSMQQETSHM TAAPQTNGHQ IFPEIDMSAG DSSSIVRATV VQASTVFYDT PATLDKAERL LSEAAENGSQ LVVFPEAFIG GYPRGSTFEL AIGSRTAKGR
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV

Arabidopsis Description

NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.