Factsheet for VIT_02s0033g00700.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 3
cytosol 1
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0033g00850.t01	Wine grape	cytosol, peroxisome, plastid	85.33	98.62
VIT_02s0033g00670.t01	Wine grape	cytosol, peroxisome, plastid	95.21	96.66
VIT_02s0033g00790.t01	Wine grape	cytosol, peroxisome, plastid	95.21	96.66
VIT_02s0033g00660.t01	Wine grape	cytosol, peroxisome, plastid	94.61	96.05
VIT_02s0033g00770.t01	Wine grape	cytosol, peroxisome, plastid	94.61	96.05
VIT_02s0033g00800.t01	Wine grape	cytosol, peroxisome, plastid	94.61	96.05
VIT_02s0033g00870.t01	Wine grape	cytosol, peroxisome, plastid	94.31	95.74
VIT_02s0109g00430.t01	Wine grape	cytosol, peroxisome, plastid	91.32	92.99
VIT_02s0033g00840.t01	Wine grape	cytosol, extracellular	33.23	88.8
VIT_02s0033g00630.t01	Wine grape	cytosol	85.63	82.42
VIT_06s0080g00940.t01	Wine grape	cytosol	70.06	67.44
VIT_06s0080g00950.t01	Wine grape	cytosol	23.65	65.29
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	67.66	63.66
CDY09130	Canola	cytosol	66.77	62.47
CDY35679	Canola	cytosol	66.47	62.36
Bra020184.1-P	Field mustard	cytosol	66.17	61.9

Protein Annotations

EntrezGene:100251702	wikigene:100251702	EntrezGene:100853652	wikigene:100853652	Gene3D:3.60.110.10	MapMan:9.5.2.5
EMBL:AM467046	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	ProteinID:CAN74858	ProteinID:CAN74858.1	ProteinID:CBI37421
ProteinID:CBI37421.3	UniProt:D7U3V2	EMBL:FN596505	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010	InterPro:IPR036526
EntrezGene:LOC100251702	wikigene:LOC100251702	EntrezGene:LOC100853652	wikigene:LOC100853652	InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795
ScanProsite:PS00920	PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF5	SUPFAM:SSF56317	UniParc:UPI00015CC6A7
ArrayExpress:VIT_02s0033g00700	EnsemblPlantsGene:VIT_02s0033g00700	EnsemblPlants:VIT_02s0033g00700.t01	RefSeq:XP_003631500	RefSeq:XP_003631500.1	RefSeq:XP_003631514
RefSeq:XP_003631514.1	RefSeq:XP_010665075.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2:-:15324013..15326009

Molecular Weight (calculated)

37247.3 Da

IEP (calculated)

5.253

GRAVY (calculated)

-0.228

Length

334 amino acids

Sequence
(BLAST)

001: MSSTVRATVV QASSVFYDTP ATLDKAERFL KEAAALGSQL VVFPESFIGG YPRGYNFADQ SPRGKESFRK YHASAINVPG PEVDRLASMA AKYKVYLVIG
101: VIERDGYTLY CTVLFFDPEG NYLGKHRKLM PTYWERLVWG FGDCSTTPVY DTPYGKLGSV ICWENRMPLL RTAMYGKGIE IYCAPTADSG DTWVATMRHI
201: AMEGGCYVLS PIQFCRRKDY PPPPEYLYSP TEEDVTPDSI VWAGGSVIIS PHGEILAGPN YEGEGLFTAD LDVRGEIPKA KFQFDVVGHY SRADVLSLTV
301: NNRPLLPVTF TSSPSKIKDD DEIDECKDIK RWAI

Best Arabidopsis Sequence Match ( AT5G22300.1 )
(BLAST)

001: MSMQQETSHM TAAPQTNGHQ IFPEIDMSAG DSSSIVRATV VQASTVFYDT PATLDKAERL LSEAAENGSQ LVVFPEAFIG GYPRGSTFEL AIGSRTAKGR
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV

Arabidopsis Description

NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.