Factsheet for VIT_02s0033g00630.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
plasma membrane 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0033g00670.t01	Wine grape	cytosol, peroxisome, plastid	84.73	89.36
VIT_02s0033g00660.t01	Wine grape	cytosol, peroxisome, plastid	84.15	88.75
VIT_02s0033g00770.t01	Wine grape	cytosol, peroxisome, plastid	84.15	88.75
VIT_02s0033g00800.t01	Wine grape	cytosol, peroxisome, plastid	83.0	87.54
VIT_02s0033g00870.t01	Wine grape	cytosol, peroxisome, plastid	82.71	87.23
VIT_02s0033g00790.t01	Wine grape	cytosol, peroxisome, plastid	82.13	86.63
VIT_02s0033g00850.t01	Wine grape	cytosol, peroxisome, plastid	71.76	86.16
VIT_02s0033g00700.t01	Wine grape	cytosol, peroxisome, plastid	82.42	85.63
VIT_02s0033g00840.t01	Wine grape	cytosol, extracellular	30.84	85.6
VIT_02s0109g00430.t01	Wine grape	cytosol, peroxisome, plastid	78.39	82.93
VIT_06s0080g00950.t01	Wine grape	cytosol	21.61	61.98
VIT_06s0080g00940.t01	Wine grape	cytosol	59.37	59.37
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	56.77	55.49
CDY09130	Canola	cytosol	57.06	55.46
CDY35679	Canola	cytosol	56.48	55.06
Bra020184.1-P	Field mustard	cytosol	56.2	54.62

Protein Annotations

EntrezGene:100241354	wikigene:100241354	Gene3D:3.60.110.10	MapMan:9.5.2.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf
ProteinID:CCB60335	ProteinID:CCB60335.1	ncoils:Coil	UniProt:F6I069	EMBL:FN596505	GO:GO:0003674
GO:GO:0003824	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810
InterPro:IPR003010	InterPro:IPR036526	EntrezGene:LOC100241354	wikigene:LOC100241354	PFAM:PF00795	PFscan:PS50263
PANTHER:PTHR23088	PANTHER:PTHR23088:SF5	SUPFAM:SSF56317	UniParc:UPI000210948F	ArrayExpress:VIT_02s0033g00630	EnsemblPlantsGene:VIT_02s0033g00630
EnsemblPlants:VIT_02s0033g00630.t01	RefSeq:XP_002268043	RefSeq:XP_002268043.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr2:-:15083007..15086780

Molecular Weight (calculated)

39401.1 Da

IEP (calculated)

7.425

GRAVY (calculated)

-0.450

Length

347 amino acids

Sequence
(BLAST)

001: MVGRDEIERK EKRHKDEIEV RKEIRREKGK QPLSKTKMLK KDKAERFLKE AAAVESQLVV FPEAFIGGYP RGYNFADQSP RGKESFLKYH ASAINVPGSE
101: VDRLASMAAK YKVYLVTGVV VRDGYTLYCT VLFFDPEGNY LGKHRKLVPT YWERLFWGFA DCSTTPVYDT PYGKLGSVIC WENRMPLFRT AMYGKGIEIY
201: CAPTADSRDT WVATMRHVAI EGGCYVLSPI QFCRRKDYPP PPEYLYSPTE EDVTPDSIVW VGGSVIISPH GKILPGPNYE GEGLFTADLD VRNEIPKAKF
301: QFDAVGHYSR ADVLSLTVNN RPLLPVTFTS SPSKIKDDEE MDECKDI

Best Arabidopsis Sequence Match ( AT3G44300.1 )
(BLAST)

001: MSTSENTPFN GVASSTIVRA TIVQASTVYN DTPATLEKAN KFIVEAASKG SELVVFPEAF IGGYPRGFRF GLGVGVHNEE GRDEFRKYHA SAIKVPGPEV
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK

Arabidopsis Description

NIT2NIT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V952]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.