Factsheet for VIT_02s0033g00790.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 3
cytosol 1
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0033g00670.t01	Wine grape	cytosol, peroxisome, plastid	96.66	96.66
VIT_02s0033g00850.t01	Wine grape	cytosol, peroxisome, plastid	84.5	96.19
VIT_02s0033g00660.t01	Wine grape	cytosol, peroxisome, plastid	96.05	96.05
VIT_02s0033g00770.t01	Wine grape	cytosol, peroxisome, plastid	96.05	96.05
VIT_02s0033g00800.t01	Wine grape	cytosol, peroxisome, plastid	95.44	95.44
VIT_02s0033g00700.t01	Wine grape	cytosol, peroxisome, plastid	96.66	95.21
VIT_02s0033g00870.t01	Wine grape	cytosol, peroxisome, plastid	95.14	95.14
VIT_02s0109g00430.t01	Wine grape	cytosol, peroxisome, plastid	92.4	92.68
VIT_02s0033g00840.t01	Wine grape	cytosol, extracellular	33.43	88.0
VIT_02s0033g00630.t01	Wine grape	cytosol	86.63	82.13
VIT_06s0080g00940.t01	Wine grape	cytosol	70.52	66.86
VIT_06s0080g00950.t01	Wine grape	cytosol	23.71	64.46
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	68.69	63.66
CDY09130	Canola	cytosol	68.39	63.03
CDY35679	Canola	cytosol	68.09	62.92
Bra020184.1-P	Field mustard	cytosol	67.78	62.47

Protein Annotations

EntrezGene:100248203	wikigene:100248203	Gene3D:3.60.110.10	MapMan:9.5.2.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf
ProteinID:CBI37426	ProteinID:CBI37426.3	UniProt:D7U3V7	EMBL:FN596505	GO:GO:0003674	GO:GO:0003824
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010
InterPro:IPR036526	EntrezGene:LOC100248203	wikigene:LOC100248203	InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920
PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF5	SUPFAM:SSF56317	UniParc:UPI00015CC7A1	ArrayExpress:VIT_02s0033g00790
EnsemblPlantsGene:VIT_02s0033g00790	EnsemblPlants:VIT_02s0033g00790.t01	RefSeq:XP_002269361	RefSeq:XP_002269361.1	:	:

Description

No Description!

Coordinates

chr2:-:15479009..15480899

Molecular Weight (calculated)

36651.6 Da

IEP (calculated)

5.735

GRAVY (calculated)

-0.237

Length

329 amino acids

Sequence
(BLAST)

001: MSSTVRATVV QASSIFYDTP ATLDKAERFL KEAAALGSQL VVFPEAFIGG YPRGYNFADR SPRGKESFRK YHASAINVPG PEVDRLASMA AKYRVYLVTG
101: VIEREGYTLY CTVLFFDPKG NYLGKHRKLM PTYWERLVWG FGDCSTTPVY DTPYGKLGSV ICWENRMPLL RTAMYGKGIE IYCAPTADSG DTWVATMRHV
201: AIEGGCYVLS PIQFCRRKDY PPPPEYLYSP TEEDVTPDSI VWAGGSVIIS PHGEILAGPN YEGEGLFTAD LDVRGEIPKA KFQFDVVGHY SRADVLSLTV
301: NNRPLLPVTF TSSPSKIKDD DETDECKYI

Best Arabidopsis Sequence Match ( AT5G22300.1 )
(BLAST)

001: MSMQQETSHM TAAPQTNGHQ IFPEIDMSAG DSSSIVRATV VQASTVFYDT PATLDKAERL LSEAAENGSQ LVVFPEAFIG GYPRGSTFEL AIGSRTAKGR
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV

Arabidopsis Description

NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.