Factsheet for VIT_06s0080g00940.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30383	Soybean	cytosol, nucleus	88.47	87.71
KRH25286	Soybean	cytosol	87.9	87.14
Solyc11g068730.1.1	Tomato	extracellular, nucleus	87.03	86.04
PGSC0003DMT400067695	Potato	cytoskeleton, cytosol, peroxisome	86.74	85.75
VIT_06s0080g00950.t01	Wine grape	cytosol	27.09	77.69
VIT_02s0109g00430.t01	Wine grape	cytosol, peroxisome, plastid	67.15	71.04
VIT_02s0033g00850.t01	Wine grape	cytosol, peroxisome, plastid	58.79	70.59
VIT_02s0033g00790.t01	Wine grape	cytosol, peroxisome, plastid	66.86	70.52
VIT_02s0033g00670.t01	Wine grape	cytosol, peroxisome, plastid	66.57	70.21
VIT_02s0033g00700.t01	Wine grape	cytosol, peroxisome, plastid	67.44	70.06
VIT_02s0033g00770.t01	Wine grape	cytosol, peroxisome, plastid	66.28	69.91
VIT_02s0033g00660.t01	Wine grape	cytosol, peroxisome, plastid	65.99	69.6
VIT_02s0033g00800.t01	Wine grape	cytosol, peroxisome, plastid	65.99	69.6
VIT_02s0033g00870.t01	Wine grape	cytosol, peroxisome, plastid	65.99	69.6
VIT_02s0033g00630.t01	Wine grape	cytosol	59.37	59.37
VIT_02s0033g00840.t01	Wine grape	cytosol, extracellular	20.75	57.6
TraesCS6A01G340200.1	Wheat	cytosol	20.17	38.46

Protein Annotations

EntrezGene:100250098	wikigene:100250098	Gene3D:3.60.110.10	MapMan:9.5.2.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf
ProteinID:CCB51630	ProteinID:CCB51630.1	UniProt:F6HHD4	EMBL:FN595757	GO:GO:0003674	GO:GO:0003824
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010
InterPro:IPR036526	EntrezGene:LOC100250098	wikigene:LOC100250098	InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920
ScanProsite:PS00921	PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF31	SUPFAM:SSF56317	TIGR:TC55412
TIGR:TC57383	UniParc:UPI0001985AF6	ArrayExpress:VIT_06s0080g00940	EnsemblPlantsGene:VIT_06s0080g00940	EnsemblPlants:VIT_06s0080g00940.t01	unigene:Vvi.4011
RefSeq:XP_002272837	RefSeq:XP_002272837.1	:	:	:	:

Description

No Description!

Coordinates

chr6:-:21022202..21029341

Molecular Weight (calculated)

37628.8 Da

IEP (calculated)

4.961

GRAVY (calculated)

-0.049

Length

347 amino acids

Sequence
(BLAST)

001: MALIPATVND RPLFAEVDMG ADSSAPTVRA TVVQASTVFY DTPATLDKAE RLLAEASSYG SQLVVFPEAF IGGYPRGSNF GVTIGNRTAK GREDFRKYHA
101: AAIDVPGPEV DRLAAMAGKY KVYLVMGVIE RDGYTLYCTV LFFDSQGHYL GKHRKVMPTA LERIIWGFGD GSTIPVYETP IGKIGAAICW ENRMPLLRTA
201: MYAKGIEIYC APTADARDIW QSSMTHIALE GGCFVLSANQ FCRRKDYPPP PEYEFSGADD LTPDSVVCAG GSVIISPSGT VLAGPNYDGE ALISADLDLG
301: EIARAKFDFD VVGHYSRPEV LSLVVKDNPT KPVTFTSASV KTEDFQK

Best Arabidopsis Sequence Match ( AT5G22300.1 )
(BLAST)

001: MSMQQETSHM TAAPQTNGHQ IFPEIDMSAG DSSSIVRATV VQASTVFYDT PATLDKAERL LSEAAENGSQ LVVFPEAFIG GYPRGSTFEL AIGSRTAKGR
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV

Arabidopsis Description

NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [cytosol,peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.