Factsheet for VIT_02s0033g00850.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 3
cytosol 1
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0033g00840.t01	Wine grape	cytosol, extracellular	38.41	88.8
VIT_02s0033g00700.t01	Wine grape	cytosol, peroxisome, plastid	98.62	85.33
VIT_02s0033g00670.t01	Wine grape	cytosol, peroxisome, plastid	96.89	85.11
VIT_02s0033g00800.t01	Wine grape	cytosol, peroxisome, plastid	96.54	84.8
VIT_02s0033g00660.t01	Wine grape	cytosol, peroxisome, plastid	96.19	84.5
VIT_02s0033g00770.t01	Wine grape	cytosol, peroxisome, plastid	96.19	84.5
VIT_02s0033g00790.t01	Wine grape	cytosol, peroxisome, plastid	96.19	84.5
VIT_02s0033g00870.t01	Wine grape	cytosol, peroxisome, plastid	96.19	84.5
VIT_02s0109g00430.t01	Wine grape	cytosol, peroxisome, plastid	91.7	80.79
VIT_02s0033g00630.t01	Wine grape	cytosol	86.16	71.76
VIT_06s0080g00950.t01	Wine grape	cytosol	27.34	65.29
VIT_06s0080g00940.t01	Wine grape	cytosol	70.59	58.79
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	67.82	55.21
CDY09130	Canola	cytosol	67.47	54.62
CDY35679	Canola	cytosol	67.13	54.49
Bra020184.1-P	Field mustard	cytosol	66.78	54.06

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	ProteinID:CCB60346	ProteinID:CCB60346.1
UniProt:F6I080	EMBL:FN596505	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010	InterPro:IPR036526	InterPro:Nitrilase/CN_hydratase_CS
PFAM:PF00795	ScanProsite:PS00920	PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF5	SUPFAM:SSF56317
UniParc:UPI0002109498	ArrayExpress:VIT_02s0033g00850	EnsemblPlantsGene:VIT_02s0033g00850	EnsemblPlants:VIT_02s0033g00850.t01	:	:

Description

No Description!

Coordinates

chr2:-:15557872..15559772

Molecular Weight (calculated)

32025.0 Da

IEP (calculated)

4.823

GRAVY (calculated)

-0.181

Length

289 amino acids

Sequence
(BLAST)

001: MSSTVRATVV QASSIFYDTP ATLDKAERFL KEAAALGSQL VVFPESFIGG YPRGYNFAHQ SPRGKESFRK YHASAINVPG PEVDRLASMA AKYKVYLVIG
101: VVERDGYTLY CTVLFFDPEV ICWENRMPLL RTAMYGKGIE IYCAPTADSG DTWVATMRHI AMEGGCYVLS PIQFCRRKDY PPPPEYLYSP TEEDVTPDSI
201: VWAGGSVIIS PHGEILAGPN YEGEGLFTAD LDVRGEIPKA KFQFDVVGHY SRADVLSLTV NNRPLLPVTF TSSPSKIKDD DETDECKDI

Best Arabidopsis Sequence Match ( AT3G44300.1 )
(BLAST)

001: MSTSENTPFN GVASSTIVRA TIVQASTVYN DTPATLEKAN KFIVEAASKG SELVVFPEAF IGGYPRGFRF GLGVGVHNEE GRDEFRKYHA SAIKVPGPEV
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK

Arabidopsis Description

NIT2NIT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V952]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.