Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0080g00950.t01 | Wine grape | cytosol | 48.0 | 49.59 |
| VIT_02s0033g00850.t01 | Wine grape | cytosol, peroxisome, plastid | 88.8 | 38.41 |
| VIT_02s0033g00660.t01 | Wine grape | cytosol, peroxisome, plastid | 91.2 | 34.65 |
| VIT_02s0033g00670.t01 | Wine grape | cytosol, peroxisome, plastid | 91.2 | 34.65 |
| VIT_02s0033g00770.t01 | Wine grape | cytosol, peroxisome, plastid | 90.4 | 34.35 |
| VIT_02s0033g00790.t01 | Wine grape | cytosol, peroxisome, plastid | 88.0 | 33.43 |
| VIT_02s0033g00800.t01 | Wine grape | cytosol, peroxisome, plastid | 88.0 | 33.43 |
| VIT_02s0033g00700.t01 | Wine grape | cytosol, peroxisome, plastid | 88.8 | 33.23 |
| VIT_02s0033g00870.t01 | Wine grape | cytosol, peroxisome, plastid | 87.2 | 33.13 |
| VIT_02s0033g00630.t01 | Wine grape | cytosol | 85.6 | 30.84 |
| VIT_02s0109g00430.t01 | Wine grape | cytosol, peroxisome, plastid | 80.8 | 30.79 |
| VIT_06s0080g00940.t01 | Wine grape | cytosol | 57.6 | 20.75 |
| Bra020184.1-P | Field mustard | cytosol | 54.4 | 19.05 |
| CDY09130 | Canola | cytosol | 54.4 | 19.05 |
| CDY35679 | Canola | cytosol | 53.6 | 18.82 |
| AT5G22300.1 | Thale cress | cytosol, peroxisome, plastid | 51.2 | 18.03 |
Protein Annotations
| ArrayExpress:VIT_02s0033g00840 | EMBL:FN596505 | EnsemblPlants:VIT_02s0033g00840.t01 | EnsemblPlantsGene:VIT_02s0033g00840 | Gene3D:3.60.110.10 | InterPro:C-N_Hydrolase_sf |
| InterPro:IPR036526 | PANTHER:PTHR23088 | PANTHER:PTHR23088:SF31 | ProteinID:CBI37428 | ProteinID:CBI37428.3 | SUPFAM:SSF56317 |
| UniParc:UPI0001BE4644 | UniProt:D7U3V9 | MapMan:50.3.5 | : | : | : |
Description
No Description!
Coordinates
chr2:-:15547958..15557175
Molecular Weight (calculated)
13949.4 Da
IEP (calculated)
4.196
GRAVY (calculated)
-0.325
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSRLFFSFL FSMKDYPPPP EYLYSPTEED VTPDSIVWAG GSVIISTHGE ILTGPNYEGE GLFTADLDVR GEIPKAKFQF DVVGHYSRAD VLSLTVNNRP
101: PLPVTFTSSP SKIKDNEEMD ECKDI
101: PLPVTFTSSP SKIKDNEEMD ECKDI
001: MKGPVTWAFT WVNLIANKPN NCPEVERLAL MAKKYKVYLV MGVIEREGYT LYCTVLFFDS QGLFLGKHRK LMPTALERCI WGFGDGSTIP VFDTPIGKIG
101: AAICWENRMP SLRTAMYAKG IEIYCAPTAD SRETWLASMT HIALEGGCFV LSANQFCRRK DYPSPPEYMF SGSEESLTPD SVVCAGGSSI ISPLGIVLAG
201: PNYRGEALIT ADLDLGDIAR AKFDFDVVGH YSRPEVFSLN IREHPRKAVS FKTSKVMEDE SV
101: AAICWENRMP SLRTAMYAKG IEIYCAPTAD SRETWLASMT HIALEGGCFV LSANQFCRRK DYPSPPEYMF SGSEESLTPD SVVCAGGSSI ISPLGIVLAG
201: PNYRGEALIT ADLDLGDIAR AKFDFDVVGH YSRPEVFSLN IREHPRKAVS FKTSKVMEDE SV
Arabidopsis Description
NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.