Factsheet for VIT_02s0033g00770.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
plastid 2
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0033g00670.t01	Wine grape	cytosol, peroxisome, plastid	99.39	99.39
VIT_02s0033g00660.t01	Wine grape	cytosol, peroxisome, plastid	98.78	98.78
VIT_02s0033g00800.t01	Wine grape	cytosol, peroxisome, plastid	97.57	97.57
VIT_02s0033g00870.t01	Wine grape	cytosol, peroxisome, plastid	97.26	97.26
VIT_02s0033g00850.t01	Wine grape	cytosol, peroxisome, plastid	84.5	96.19
VIT_02s0033g00790.t01	Wine grape	cytosol, peroxisome, plastid	96.05	96.05
VIT_02s0033g00700.t01	Wine grape	cytosol, peroxisome, plastid	96.05	94.61
VIT_02s0109g00430.t01	Wine grape	cytosol, peroxisome, plastid	91.49	91.77
VIT_02s0033g00840.t01	Wine grape	cytosol, extracellular	34.35	90.4
VIT_02s0033g00630.t01	Wine grape	cytosol	88.75	84.15
VIT_06s0080g00940.t01	Wine grape	cytosol	69.91	66.28
VIT_06s0080g00950.t01	Wine grape	cytosol	23.71	64.46
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	67.48	62.54
CDY09130	Canola	cytosol	67.17	61.9
CDY35679	Canola	cytosol	66.87	61.8
Bra020184.1-P	Field mustard	cytosol	66.57	61.34

Protein Annotations

EntrezGene:100253338	wikigene:100253338	Gene3D:3.60.110.10	MapMan:9.5.2.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf
ProteinID:CCB60342	ProteinID:CCB60342.1	ncoils:Coil	UniProt:F6I076	EMBL:FN596505	GO:GO:0003674
GO:GO:0003824	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810
InterPro:IPR003010	InterPro:IPR036526	EntrezGene:LOC100253338	wikigene:LOC100253338	InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795
ScanProsite:PS00920	PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF5	SUPFAM:SSF56317	UniParc:UPI00015CC7A0
ArrayExpress:VIT_02s0033g00770	EnsemblPlantsGene:VIT_02s0033g00770	EnsemblPlants:VIT_02s0033g00770.t01	RefSeq:XP_002269316	RefSeq:XP_002269316.1	:

Description

No Description!

Coordinates

chr2:-:15448609..15450470

Molecular Weight (calculated)

36608.4 Da

IEP (calculated)

4.965

GRAVY (calculated)

-0.225

Length

329 amino acids

Sequence
(BLAST)

001: MSSTVRATVV QASSIFYDTP ATLDKAERFL KEAAALGSQL VVFPEAFIGG YPRGYNFADQ SPRGKESFRK YHASAINVPG PEVDRLASMA AKYKVYLVTG
101: VVERDGYTLY CTVLFFDPEG NYLGKHRKLM PTYWERLFWG FGDCSTTPVY DTPYGKLGSV ICWENRMPLF RTSMYGKGIE IYCAPTADSG DTWVATMRHV
201: AIEGGCYVLS PIQFCRRKDY PPPPEYLYSP TEEDVTPDSI VWAGGSVIIS PHGEILAGPN YEGEGLFTAD LDVRGEIPKA KFQFDVVGHY SRADVLSLTV
301: NNCPLLPVTF TSSPSKIKDN EEMDECKDI

Best Arabidopsis Sequence Match ( AT3G44300.1 )
(BLAST)

001: MSTSENTPFN GVASSTIVRA TIVQASTVYN DTPATLEKAN KFIVEAASKG SELVVFPEAF IGGYPRGFRF GLGVGVHNEE GRDEFRKYHA SAIKVPGPEV
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK

Arabidopsis Description

NIT2NIT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V952]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.