Factsheet for VIT_02s0033g00660.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
plastid 2
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0033g00670.t01	Wine grape	cytosol, peroxisome, plastid	99.39	99.39
VIT_02s0033g00770.t01	Wine grape	cytosol, peroxisome, plastid	98.78	98.78
VIT_02s0033g00800.t01	Wine grape	cytosol, peroxisome, plastid	96.96	96.96
VIT_02s0033g00870.t01	Wine grape	cytosol, peroxisome, plastid	96.66	96.66
VIT_02s0033g00850.t01	Wine grape	cytosol, peroxisome, plastid	84.5	96.19
VIT_02s0033g00790.t01	Wine grape	cytosol, peroxisome, plastid	96.05	96.05
VIT_02s0033g00700.t01	Wine grape	cytosol, peroxisome, plastid	96.05	94.61
VIT_02s0109g00430.t01	Wine grape	cytosol, peroxisome, plastid	91.49	91.77
VIT_02s0033g00840.t01	Wine grape	cytosol, extracellular	34.65	91.2
VIT_02s0033g00630.t01	Wine grape	cytosol	88.75	84.15
VIT_06s0080g00940.t01	Wine grape	cytosol	69.6	65.99
VIT_06s0080g00950.t01	Wine grape	cytosol	23.71	64.46
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	67.17	62.25
CDY09130	Canola	cytosol	66.87	61.62
CDY35679	Canola	cytosol	66.57	61.52
Bra020184.1-P	Field mustard	cytosol	66.26	61.06

Protein Annotations

EntrezGene:100241359	wikigene:100241359	Gene3D:3.60.110.10	MapMan:9.5.2.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf
ProteinID:CCB60337	ProteinID:CCB60337.1	UniProt:F6I071	EMBL:FN596505	GO:GO:0003674	GO:GO:0003824
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010
InterPro:IPR036526	EntrezGene:LOC100241359	wikigene:LOC100241359	InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920
PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF31	SUPFAM:SSF56317	UniParc:UPI00015CC6A4	ArrayExpress:VIT_02s0033g00660
EnsemblPlantsGene:VIT_02s0033g00660	EnsemblPlants:VIT_02s0033g00660.t01	unigene:Vvi.25895	RefSeq:XP_002268780	RefSeq:XP_002268780.1	RefSeq:XP_003631498
RefSeq:XP_003631498.1	RefSeq:XP_003631499	RefSeq:XP_003631499.1	:	:	:

Description

No Description!

Coordinates

chr2:-:15250145..15252075

Molecular Weight (calculated)

36601.3 Da

IEP (calculated)

5.091

GRAVY (calculated)

-0.256

Length

329 amino acids

Sequence
(BLAST)

001: MSSTVRATVV QASSIFYDTP ATLDKAERFL KEAAALGSQL VVFPEAFIGG YPRGYNFADQ SPRGKESFRK YHASAINVPG PEADRLASMA AKYKVYLVTG
101: VVERDGYTLY STVLFFDPEG NYLGKHRKLM PTYWERLFWG FGDCSTTPVY DTPYGKLGSV ICWENRMPLF RTAMYGKGIE IYCAPTADSG DTWVATMRHV
201: AIEGGCYVLS PIQFCRRKDY PPPPEYLYSP TEEDVTPDSI VWAGGSVIIS PHGEILAGPN YEGEGLFTAD LDVRGEIPKA KFQFDVVGHY SRADVLSLTV
301: NNRPLLPVTF TSSPSKIKDN EEMDECKDI

Best Arabidopsis Sequence Match ( AT3G44300.1 )
(BLAST)

001: MSTSENTPFN GVASSTIVRA TIVQASTVYN DTPATLEKAN KFIVEAASKG SELVVFPEAF IGGYPRGFRF GLGVGVHNEE GRDEFRKYHA SAIKVPGPEV
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK

Arabidopsis Description

NIT2NIT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V952]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.