Factsheet for VIT_02s0109g00430.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
plastid 2
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0033g00790.t01	Wine grape	cytosol, peroxisome, plastid	92.68	92.4
VIT_02s0033g00670.t01	Wine grape	cytosol, peroxisome, plastid	92.38	92.1
VIT_02s0033g00850.t01	Wine grape	cytosol, peroxisome, plastid	80.79	91.7
VIT_02s0033g00660.t01	Wine grape	cytosol, peroxisome, plastid	91.77	91.49
VIT_02s0033g00770.t01	Wine grape	cytosol, peroxisome, plastid	91.77	91.49
VIT_02s0033g00800.t01	Wine grape	cytosol, peroxisome, plastid	91.77	91.49
VIT_02s0033g00870.t01	Wine grape	cytosol, peroxisome, plastid	91.77	91.49
VIT_02s0033g00700.t01	Wine grape	cytosol, peroxisome, plastid	92.99	91.32
VIT_02s0033g00840.t01	Wine grape	cytosol, extracellular	30.79	80.8
VIT_02s0033g00630.t01	Wine grape	cytosol	82.93	78.39
VIT_06s0080g00940.t01	Wine grape	cytosol	71.04	67.15
VIT_06s0080g00950.t01	Wine grape	cytosol	24.39	66.12
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	68.29	63.1
CDY09130	Canola	cytosol	68.29	62.75
CDY35679	Canola	cytosol	67.99	62.64
Bra020184.1-P	Field mustard	cytosol	67.68	62.18

Protein Annotations

EntrezGene:100240765	wikigene:100240765	Gene3D:3.60.110.10	MapMan:9.5.2.5	EMBL:AM487854	InterPro:C-N_Hydrolase
InterPro:C-N_Hydrolase_sf	ProteinID:CAN64378	ProteinID:CAN64378.1	ProteinID:CBI23259	ProteinID:CBI23259.3	UniProt:D7SYM2
EMBL:FN595250	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010	InterPro:IPR036526	EntrezGene:LOC100240765	wikigene:LOC100240765
InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920	PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF5
SUPFAM:SSF56317	TIGR:TC64943	UniParc:UPI00015CD3CD	ArrayExpress:VIT_02s0109g00430	EnsemblPlantsGene:VIT_02s0109g00430	EnsemblPlants:VIT_02s0109g00430.t01
unigene:Vvi.25404	RefSeq:XP_002271633	RefSeq:XP_002271633.1	RefSeq:XP_010664545.1	SEG:seg	:

Description

No Description!

Coordinates

chr2:+:13235365..13237571

Molecular Weight (calculated)

36365.4 Da

IEP (calculated)

5.457

GRAVY (calculated)

-0.236

Length

328 amino acids

Sequence
(BLAST)

001: MSSPVRATVV QASSIFFDTP ATLDKAEKLL KEAAALGSQL VVFPEAFIGG YPRGHNFADQ SPRGKESFRK YHASAINVPG PEVDRLASMA RKYKVYIVTG
101: VIERDGYTLY CTVLFFDPEG NYLGKHRKLM PTYRERLVWG FGDCSTTPVY DTPYGKLGSV ICWENRMPLL RTAMYGKGIE IYCAPSADSG DTWVATMRHV
201: AMEGGCYVLS PIQFCRRKDY PPPPEYLYSP TEEDVTPDSI VWAGGSVIIS PTGEVLAGPN YEGEGLFTAD LDVRGEIPKA KFMFDVVGHY SRPDVLSLTV
301: NNRPLLPVTF TSSPSKIKDD EMDECKDV

Best Arabidopsis Sequence Match ( AT5G22300.1 )
(BLAST)

001: MSMQQETSHM TAAPQTNGHQ IFPEIDMSAG DSSSIVRATV VQASTVFYDT PATLDKAERL LSEAAENGSQ LVVFPEAFIG GYPRGSTFEL AIGSRTAKGR
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV

Arabidopsis Description

NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.