Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH30383 | Soybean | cytosol, nucleus | 98.0 | 98.0 |
| VIT_06s0080g00940.t01 | Wine grape | cytosol | 87.14 | 87.9 |
| PGSC0003DMT400067695 | Potato | cytoskeleton, cytosol, peroxisome | 87.14 | 86.89 |
| Solyc11g068730.1.1 | Tomato | extracellular, nucleus | 86.57 | 86.32 |
| CDY09130 | Canola | cytosol | 77.14 | 75.63 |
| CDY35679 | Canola | cytosol | 76.86 | 75.56 |
| Bra020184.1-P | Field mustard | cytosol | 76.57 | 75.07 |
| AT5G22300.1 | Thale cress | cytosol, peroxisome, plastid | 74.57 | 73.52 |
| TraesCS6A01G340200.1 | Wheat | cytosol | 19.71 | 37.91 |
Protein Annotations
| EntrezGene:100810230 | Gene3D:3.60.110.10 | MapMan:9.5.2.5 | EMBL:ACUP02007228 | EMBL:BT094034 | InterPro:C-N_Hydrolase |
| InterPro:C-N_Hydrolase_sf | UniProt:C6T972 | EnsemblPlantsGene:GLYMA_12G092300 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006807 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016810 | InterPro:IPR003010 | InterPro:IPR036526 |
| EnsemblPlants:KRH25286 | ProteinID:KRH25286 | ProteinID:KRH25286.1 | InterPro:Nitrilase/CN_hydratase_CS | PFAM:PF00795 | ScanProsite:PS00920 |
| ScanProsite:PS00921 | PFscan:PS50263 | PANTHER:PTHR23088 | PANTHER:PTHR23088:SF31 | SUPFAM:SSF56317 | UniParc:UPI0001B164FE |
Description
hypothetical protein
Coordinates
chr12:-:7550246..7557331
Molecular Weight (calculated)
37951.3 Da
IEP (calculated)
5.227
GRAVY (calculated)
-0.013
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MALVTTNPTI NEGPLFAEVD MGSDFNAPTV RATVVQASTI FYDTPATLDK AERLLAEATS YGSQLVVFPE AFVGGYPRGS AFGLSIGNRT VKGREEFRKY
101: HSAAIDVPGP EVDRLAAMAG KYKVHLVMGV IERDGYTLYC TVLFFDSQGH YLGKHRKIMP TALERVIWGF GDGSTIPVFE TPVGKIGAAI CWENRMPLLR
201: TAMYAKGVEI YCAPTADARD VWQASMTHIA LEGGCFVLSA NQFCRRRDYP PPPEYVFAGT EVDLTPDSVV CAGGSVIISP LGAVLAGPNY DGEALISADL
301: DLGEIARAKF DFDVVGHYSR PEVLSLTVKD HPTNPVTFTS TSTKIEDKTK
101: HSAAIDVPGP EVDRLAAMAG KYKVHLVMGV IERDGYTLYC TVLFFDSQGH YLGKHRKIMP TALERVIWGF GDGSTIPVFE TPVGKIGAAI CWENRMPLLR
201: TAMYAKGVEI YCAPTADARD VWQASMTHIA LEGGCFVLSA NQFCRRRDYP PPPEYVFAGT EVDLTPDSVV CAGGSVIISP LGAVLAGPNY DGEALISADL
301: DLGEIARAKF DFDVVGHYSR PEVLSLTVKD HPTNPVTFTS TSTKIEDKTK
001: MSMQQETSHM TAAPQTNGHQ IFPEIDMSAG DSSSIVRATV VQASTVFYDT PATLDKAERL LSEAAENGSQ LVVFPEAFIG GYPRGSTFEL AIGSRTAKGR
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV
Arabidopsis Description
NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.