Factsheet for TraesCS6A01G340200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G232400.2	Wheat	cytosol	49.45	26.16
TraesCS6A01G232300.1	Wheat	cytosol	43.41	21.94
TraesCS6A01G232500.1	Wheat	cytosol	41.21	20.6
KRH30383	Soybean	cytosol, nucleus	39.56	20.57
VIT_06s0080g00940.t01	Wine grape	cytosol	38.46	20.17
KRH25286	Soybean	cytosol	37.91	19.71
Solyc11g068730.1.1	Tomato	extracellular, nucleus	37.36	19.37
PGSC0003DMT400067695	Potato	cytoskeleton, cytosol, peroxisome	36.81	19.09
CDY09130	Canola	cytosol	33.52	17.09
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	32.97	16.9
CDY35679	Canola	cytosol	32.97	16.85
Bra020184.1-P	Field mustard	cytosol	32.42	16.53

Protein Annotations

EnsemblPlants:TraesCS6A01G340200.1	EnsemblPlantsGene:TraesCS6A01G340200	Gene3D:3.60.110.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf
InterPro:IPR003010	InterPro:IPR036526	InterPro:Nitrilase/CN_hydratase_CS	PANTHER:PTHR23088	PANTHER:PTHR23088:SF31	PFAM:PF00795
ScanProsite:PS00920	SUPFAM:SSF56317	MapMan:50.3.5	:	:	:

Description

No Description!

Coordinates

chr6A:+:573477009..573479207

Molecular Weight (calculated)

19164.6 Da

IEP (calculated)

4.546

GRAVY (calculated)

-0.059

Length

182 amino acids

Sequence
(BLAST)

001: MPLPPMSSGV GPVIAEVEMN AGADQDATTV WATVVQACSM FYDTPATFDK AEKLTAETAG YGSQLVLFPE VFVGGYPHGS AFGLTVGSRS AKGKEDFWKY
101: HTAAIDVPER TAVRPGGSSI ISPSMAVLAG PNYEGEALLT ADQDIGEIVR AKFDFDAVGN YKRAEVPSLS VNTDAVGHCK RA

Best Arabidopsis Sequence Match ( AT5G22300.1 )
(BLAST)

001: MSMQQETSHM TAAPQTNGHQ IFPEIDMSAG DSSSIVRATV VQASTVFYDT PATLDKAERL LSEAAENGSQ LVVFPEAFIG GYPRGSTFEL AIGSRTAKGR
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV

Arabidopsis Description

NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.