Factsheet for TraesCS6A01G232300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G261000.1	Wheat	cytosol	96.11	96.11
TraesCS6A01G232500.1	Wheat	cytosol	94.44	93.41
Os02t0635200-01	Rice	plasma membrane	90.83	90.33
EES05474	Sorghum	cytosol	89.72	89.47
Zm00001d051214_P001	Maize	cytosol	88.61	88.37
GSMUA_Achr8P13970_001	Banana	plastid	75.83	78.67
VIT_06s0080g00950.t01	Wine grape	cytosol	24.17	71.9
CDY35679	Canola	cytosol	67.5	68.26
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	66.94	67.89
CDY09130	Canola	cytosol	67.22	67.79
TraesCS6A01G232400.2	Wheat	cytosol	64.72	67.73
Bra020184.1-P	Field mustard	cytosol	66.67	67.23
TraesCS6A01G340200.1	Wheat	cytosol	21.94	43.41

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010
InterPro:IPR036526	InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920	ScanProsite:PS00921	PFscan:PS50263
PANTHER:PTHR23088	PANTHER:PTHR23088:SF31	SUPFAM:SSF56317	EnsemblPlantsGene:TraesCS6A01G232300	EnsemblPlants:TraesCS6A01G232300.1	TIGR:cd07564

Description

No Description!

Coordinates

chr6A:+:439666267..439669676

Molecular Weight (calculated)

38541.3 Da

IEP (calculated)

5.691

GRAVY (calculated)

0.005

Length

360 amino acids

Sequence
(BLAST)

001: MALLPSGSGS TPVIAEVEMN GGADQSATTV RATVVQASTV FYDTPATLDK AERLIAEAAG YGSQLVVFPE AFVGGYPRGS TFGFGINISM TNPKDKGKGE
101: FQKYHAAAID VPGPEVTCLA AMAGKYKVFL VMGVIEREGH TLYCSVLFFD PLGRYLGKHR KLMPTALERI IWGFGDGSTI PVYDTPLGKI GALICWENKM
201: PLLRTALYGK GIEIYCAPTA DSRPVWQASM THIALEGGCF VLSANQFCRR KDYPPPSEYA FAGLREEPSP DTVVCPGGSV IISPSREVLA GPNYDGEALI
301: TADLDMGEIV RAKFAFDVVG HYARPEVLSL VVDDQPHRPV SFTCAAEKTP AAKSDGTAKP

Best Arabidopsis Sequence Match ( AT3G44300.1 )
(BLAST)

001: MSTSENTPFN GVASSTIVRA TIVQASTVYN DTPATLEKAN KFIVEAASKG SELVVFPEAF IGGYPRGFRF GLGVGVHNEE GRDEFRKYHA SAIKVPGPEV
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK

Arabidopsis Description

NIT2NIT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V952]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.